Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ctdp1Q7TSG2 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ctdp1Q7TSG2 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Ctdp1Q7TSG2 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Ctdp1Q7TSG2 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ctdp1Q7TSG2 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ctdp1Q7TSG2 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ctdp1Q7TSG2 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ctdp1Q7TSG2 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ctdp1Q7TSG2 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.18■□□□□ 0.66
Ctdp1Q7TSG2 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.18■□□□□ 0.66
Ctdp1Q7TSG2 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC19.18■□□□□ 0.66
Ctdp1Q7TSG2 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC19.18■□□□□ 0.66
Ctdp1Q7TSG2 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Ctdp1Q7TSG2 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.18■□□□□ 0.66
Ctdp1Q7TSG2 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ctdp1Q7TSG2 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
Ctdp1Q7TSG2 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ctdp1Q7TSG2 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ctdp1Q7TSG2 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Ctdp1Q7TSG2 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Ctdp1Q7TSG2 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ctdp1Q7TSG2 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ctdp1Q7TSG2 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ctdp1Q7TSG2 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ctdp1Q7TSG2 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ctdp1Q7TSG2 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ctdp1Q7TSG2 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ctdp1Q7TSG2 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ctdp1Q7TSG2 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Ctdp1Q7TSG2 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ctdp1Q7TSG2 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ctdp1Q7TSG2 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ctdp1Q7TSG2 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ctdp1Q7TSG2 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ctdp1Q7TSG2 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ctdp1Q7TSG2 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Ctdp1Q7TSG2 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Ctdp1Q7TSG2 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC19.16■□□□□ 0.66
Ctdp1Q7TSG2 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC19.16■□□□□ 0.66
Ctdp1Q7TSG2 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ctdp1Q7TSG2 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ctdp1Q7TSG2 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ctdp1Q7TSG2 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.16■□□□□ 0.66
Ctdp1Q7TSG2 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.16■□□□□ 0.66
Ctdp1Q7TSG2 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ctdp1Q7TSG2 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC19.16■□□□□ 0.66
Ctdp1Q7TSG2 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ctdp1Q7TSG2 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ctdp1Q7TSG2 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Ctdp1Q7TSG2 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ctdp1Q7TSG2 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.16■□□□□ 0.66
Ctdp1Q7TSG2 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ctdp1Q7TSG2 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ctdp1Q7TSG2 Ddx41-204ENSMUST00000224765 2199 ntBASIC19.15■□□□□ 0.66
Ctdp1Q7TSG2 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ctdp1Q7TSG2 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ctdp1Q7TSG2 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Ctdp1Q7TSG2 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ctdp1Q7TSG2 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ctdp1Q7TSG2 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ctdp1Q7TSG2 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ctdp1Q7TSG2 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ctdp1Q7TSG2 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.66
Ctdp1Q7TSG2 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ctdp1Q7TSG2 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ctdp1Q7TSG2 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ctdp1Q7TSG2 Idnk-204ENSMUST00000226010 1898 ntBASIC19.14■□□□□ 0.65
Ctdp1Q7TSG2 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ctdp1Q7TSG2 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ctdp1Q7TSG2 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ctdp1Q7TSG2 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ctdp1Q7TSG2 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC19.14■□□□□ 0.65
Ctdp1Q7TSG2 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Ctdp1Q7TSG2 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ctdp1Q7TSG2 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ctdp1Q7TSG2 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ctdp1Q7TSG2 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ctdp1Q7TSG2 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ctdp1Q7TSG2 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ctdp1Q7TSG2 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
Ctdp1Q7TSG2 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ctdp1Q7TSG2 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ctdp1Q7TSG2 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ctdp1Q7TSG2 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.13■□□□□ 0.65
Ctdp1Q7TSG2 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ctdp1Q7TSG2 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ctdp1Q7TSG2 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ctdp1Q7TSG2 Gm43808-201ENSMUST00000202534 2065 ntBASIC19.13■□□□□ 0.65
Ctdp1Q7TSG2 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Ctdp1Q7TSG2 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ctdp1Q7TSG2 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ctdp1Q7TSG2 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ctdp1Q7TSG2 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC19.13■□□□□ 0.65
Ctdp1Q7TSG2 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC19.13■□□□□ 0.65
Ctdp1Q7TSG2 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Ctdp1Q7TSG2 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ctdp1Q7TSG2 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ctdp1Q7TSG2 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ctdp1Q7TSG2 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms