Protein–RNA interactions for Protein: Q7TMV1

Rnf139, E3 ubiquitin-protein ligase RNF139, mousemouse

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf139Q7TMV1 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.82■□□□□ 0.6
Rnf139Q7TMV1 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.82■□□□□ 0.6
Rnf139Q7TMV1 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf139Q7TMV1 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf139Q7TMV1 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf139Q7TMV1 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf139Q7TMV1 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf139Q7TMV1 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf139Q7TMV1 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Rnf139Q7TMV1 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Rnf139Q7TMV1 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf139Q7TMV1 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.81■□□□□ 0.6
Rnf139Q7TMV1 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf139Q7TMV1 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf139Q7TMV1 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf139Q7TMV1 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf139Q7TMV1 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf139Q7TMV1 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf139Q7TMV1 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf139Q7TMV1 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf139Q7TMV1 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf139Q7TMV1 Gm8969-201ENSMUST00000199694 526 ntBASIC18.81■□□□□ 0.6
Rnf139Q7TMV1 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf139Q7TMV1 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf139Q7TMV1 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Rnf139Q7TMV1 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf139Q7TMV1 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf139Q7TMV1 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf139Q7TMV1 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf139Q7TMV1 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf139Q7TMV1 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf139Q7TMV1 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.8■□□□□ 0.6
Rnf139Q7TMV1 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.8■□□□□ 0.6
Rnf139Q7TMV1 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf139Q7TMV1 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf139Q7TMV1 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf139Q7TMV1 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf139Q7TMV1 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf139Q7TMV1 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf139Q7TMV1 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.79■□□□□ 0.6
Rnf139Q7TMV1 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf139Q7TMV1 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf139Q7TMV1 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf139Q7TMV1 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.79■□□□□ 0.6
Rnf139Q7TMV1 Mir1199-201ENSMUST00000117015 119 ntBASIC18.79■□□□□ 0.6
Rnf139Q7TMV1 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf139Q7TMV1 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf139Q7TMV1 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.79■□□□□ 0.6
Rnf139Q7TMV1 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf139Q7TMV1 Gm10517-202ENSMUST00000192970 758 ntBASIC18.79■□□□□ 0.6
Rnf139Q7TMV1 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.79■□□□□ 0.6
Rnf139Q7TMV1 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf139Q7TMV1 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Rnf139Q7TMV1 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.79■□□□□ 0.6
Rnf139Q7TMV1 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf139Q7TMV1 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf139Q7TMV1 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf139Q7TMV1 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf139Q7TMV1 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.78■□□□□ 0.6
Rnf139Q7TMV1 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf139Q7TMV1 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.78■□□□□ 0.6
Rnf139Q7TMV1 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.78■□□□□ 0.6
Rnf139Q7TMV1 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf139Q7TMV1 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Rnf139Q7TMV1 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
Rnf139Q7TMV1 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf139Q7TMV1 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf139Q7TMV1 Gm4974-201ENSMUST00000209974 875 ntBASIC18.78■□□□□ 0.6
Rnf139Q7TMV1 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf139Q7TMV1 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Rnf139Q7TMV1 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rnf139Q7TMV1 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.77■□□□□ 0.6
Rnf139Q7TMV1 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Rnf139Q7TMV1 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rnf139Q7TMV1 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rnf139Q7TMV1 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rnf139Q7TMV1 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.77■□□□□ 0.6
Rnf139Q7TMV1 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.77■□□□□ 0.6
Rnf139Q7TMV1 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rnf139Q7TMV1 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rnf139Q7TMV1 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf139Q7TMV1 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.76■□□□□ 0.59
Rnf139Q7TMV1 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf139Q7TMV1 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf139Q7TMV1 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC18.76■□□□□ 0.59
Rnf139Q7TMV1 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf139Q7TMV1 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Rnf139Q7TMV1 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf139Q7TMV1 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.76■□□□□ 0.59
Rnf139Q7TMV1 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.76■□□□□ 0.59
Rnf139Q7TMV1 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf139Q7TMV1 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.76■□□□□ 0.59
Rnf139Q7TMV1 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf139Q7TMV1 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf139Q7TMV1 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Rnf139Q7TMV1 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf139Q7TMV1 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf139Q7TMV1 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.76■□□□□ 0.59
Rnf139Q7TMV1 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf139Q7TMV1 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms