Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Scn10aQ6QIY3 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC20.02■□□□□ 0.8
Scn10aQ6QIY3 Mir8098-201ENSMUST00000184011 137 ntBASIC20.02■□□□□ 0.8
Scn10aQ6QIY3 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Scn10aQ6QIY3 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Scn10aQ6QIY3 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC20.01■□□□□ 0.79
Scn10aQ6QIY3 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC20.01■□□□□ 0.79
Scn10aQ6QIY3 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Scn10aQ6QIY3 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Scn10aQ6QIY3 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Scn10aQ6QIY3 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Scn10aQ6QIY3 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC20.01■□□□□ 0.79
Scn10aQ6QIY3 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Scn10aQ6QIY3 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Scn10aQ6QIY3 Gm13884-201ENSMUST00000118103 829 ntBASIC20.01■□□□□ 0.79
Scn10aQ6QIY3 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC20.01■□□□□ 0.79
Scn10aQ6QIY3 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Scn10aQ6QIY3 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Scn10aQ6QIY3 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Scn10aQ6QIY3 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Scn10aQ6QIY3 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Scn10aQ6QIY3 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Scn10aQ6QIY3 AC153889.1-201ENSMUST00000219257 330 ntBASIC20■□□□□ 0.79
Scn10aQ6QIY3 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Scn10aQ6QIY3 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Scn10aQ6QIY3 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC20■□□□□ 0.79
Scn10aQ6QIY3 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scn10aQ6QIY3 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Scn10aQ6QIY3 Gm28659-201ENSMUST00000188013 759 ntBASIC19.99■□□□□ 0.79
Scn10aQ6QIY3 Gm43514-201ENSMUST00000198852 424 ntBASIC19.99■□□□□ 0.79
Scn10aQ6QIY3 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scn10aQ6QIY3 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scn10aQ6QIY3 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
Scn10aQ6QIY3 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scn10aQ6QIY3 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Scn10aQ6QIY3 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scn10aQ6QIY3 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC19.99■□□□□ 0.79
Scn10aQ6QIY3 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scn10aQ6QIY3 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC19.99■□□□□ 0.79
Scn10aQ6QIY3 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Scn10aQ6QIY3 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scn10aQ6QIY3 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Scn10aQ6QIY3 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.98■□□□□ 0.79
Scn10aQ6QIY3 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Scn10aQ6QIY3 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Scn10aQ6QIY3 Gm19721-201ENSMUST00000195284 1764 ntBASIC19.98■□□□□ 0.79
Scn10aQ6QIY3 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC19.98■□□□□ 0.79
Scn10aQ6QIY3 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC19.98■□□□□ 0.79
Scn10aQ6QIY3 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Scn10aQ6QIY3 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Scn10aQ6QIY3 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Scn10aQ6QIY3 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Scn10aQ6QIY3 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC19.97■□□□□ 0.79
Scn10aQ6QIY3 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Scn10aQ6QIY3 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scn10aQ6QIY3 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC19.97■□□□□ 0.79
Scn10aQ6QIY3 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scn10aQ6QIY3 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scn10aQ6QIY3 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scn10aQ6QIY3 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scn10aQ6QIY3 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC19.97■□□□□ 0.79
Scn10aQ6QIY3 AC122351.1-201ENSMUST00000220467 126 ntBASIC19.97■□□□□ 0.79
Scn10aQ6QIY3 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scn10aQ6QIY3 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scn10aQ6QIY3 Idnk-204ENSMUST00000226010 1898 ntBASIC19.97■□□□□ 0.79
Scn10aQ6QIY3 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Scn10aQ6QIY3 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Scn10aQ6QIY3 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Scn10aQ6QIY3 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Scn10aQ6QIY3 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC19.96■□□□□ 0.79
Scn10aQ6QIY3 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Scn10aQ6QIY3 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Scn10aQ6QIY3 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Scn10aQ6QIY3 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Scn10aQ6QIY3 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Scn10aQ6QIY3 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Scn10aQ6QIY3 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Scn10aQ6QIY3 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC19.95■□□□□ 0.78
Scn10aQ6QIY3 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC19.95■□□□□ 0.78
Scn10aQ6QIY3 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scn10aQ6QIY3 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scn10aQ6QIY3 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Scn10aQ6QIY3 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scn10aQ6QIY3 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Scn10aQ6QIY3 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Scn10aQ6QIY3 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
Scn10aQ6QIY3 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC19.95■□□□□ 0.78
Scn10aQ6QIY3 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC19.95■□□□□ 0.78
Scn10aQ6QIY3 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scn10aQ6QIY3 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Scn10aQ6QIY3 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scn10aQ6QIY3 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scn10aQ6QIY3 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scn10aQ6QIY3 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Scn10aQ6QIY3 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scn10aQ6QIY3 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
Scn10aQ6QIY3 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Scn10aQ6QIY3 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Scn10aQ6QIY3 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scn10aQ6QIY3 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms