Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Rad54bQ6PFE3 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Rad54bQ6PFE3 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rad54bQ6PFE3 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rad54bQ6PFE3 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rad54bQ6PFE3 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rad54bQ6PFE3 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.7■□□□□ 0.42
Rad54bQ6PFE3 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Rad54bQ6PFE3 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Rad54bQ6PFE3 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Rad54bQ6PFE3 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rad54bQ6PFE3 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Rad54bQ6PFE3 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rad54bQ6PFE3 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rad54bQ6PFE3 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rad54bQ6PFE3 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rad54bQ6PFE3 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rad54bQ6PFE3 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rad54bQ6PFE3 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Rad54bQ6PFE3 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rad54bQ6PFE3 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rad54bQ6PFE3 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.69■□□□□ 0.42
Rad54bQ6PFE3 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rad54bQ6PFE3 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rad54bQ6PFE3 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rad54bQ6PFE3 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rad54bQ6PFE3 Gm13401-201ENSMUST00000117074 291 ntBASIC17.69■□□□□ 0.42
Rad54bQ6PFE3 Gm13148-201ENSMUST00000118892 745 ntBASIC17.69■□□□□ 0.42
Rad54bQ6PFE3 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.69■□□□□ 0.42
Rad54bQ6PFE3 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rad54bQ6PFE3 Rab3c-203ENSMUST00000224180 967 ntBASIC17.69■□□□□ 0.42
Rad54bQ6PFE3 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.69■□□□□ 0.42
Rad54bQ6PFE3 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rad54bQ6PFE3 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rad54bQ6PFE3 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rad54bQ6PFE3 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rad54bQ6PFE3 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rad54bQ6PFE3 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rad54bQ6PFE3 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rad54bQ6PFE3 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rad54bQ6PFE3 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rad54bQ6PFE3 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Rad54bQ6PFE3 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rad54bQ6PFE3 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rad54bQ6PFE3 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.68■□□□□ 0.42
Rad54bQ6PFE3 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
Rad54bQ6PFE3 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rad54bQ6PFE3 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Rad54bQ6PFE3 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Rad54bQ6PFE3 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
Rad54bQ6PFE3 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rad54bQ6PFE3 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Rad54bQ6PFE3 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Rad54bQ6PFE3 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rad54bQ6PFE3 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rad54bQ6PFE3 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rad54bQ6PFE3 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Rad54bQ6PFE3 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rad54bQ6PFE3 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rad54bQ6PFE3 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Rad54bQ6PFE3 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.67■□□□□ 0.42
Rad54bQ6PFE3 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rad54bQ6PFE3 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rad54bQ6PFE3 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rad54bQ6PFE3 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.67■□□□□ 0.42
Rad54bQ6PFE3 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rad54bQ6PFE3 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.67■□□□□ 0.42
Rad54bQ6PFE3 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rad54bQ6PFE3 Gm11927-201ENSMUST00000118472 759 ntBASIC17.67■□□□□ 0.42
Rad54bQ6PFE3 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Rad54bQ6PFE3 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rad54bQ6PFE3 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rad54bQ6PFE3 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rad54bQ6PFE3 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rad54bQ6PFE3 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.67■□□□□ 0.42
Rad54bQ6PFE3 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rad54bQ6PFE3 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rad54bQ6PFE3 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Rad54bQ6PFE3 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Rad54bQ6PFE3 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rad54bQ6PFE3 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.66■□□□□ 0.42
Rad54bQ6PFE3 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rad54bQ6PFE3 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rad54bQ6PFE3 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rad54bQ6PFE3 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Rad54bQ6PFE3 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rad54bQ6PFE3 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rad54bQ6PFE3 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rad54bQ6PFE3 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rad54bQ6PFE3 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rad54bQ6PFE3 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rad54bQ6PFE3 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.66■□□□□ 0.42
Rad54bQ6PFE3 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rad54bQ6PFE3 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rad54bQ6PFE3 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rad54bQ6PFE3 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rad54bQ6PFE3 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rad54bQ6PFE3 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rad54bQ6PFE3 Gm11643-201ENSMUST00000119578 864 ntBASIC17.65■□□□□ 0.42
Rad54bQ6PFE3 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms