Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm7213-201ENSMUST00000215977 950 ntBASIC20.83■□□□□ 0.92
Nup98Q6PFD9 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Nup98Q6PFD9 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Nup98Q6PFD9 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Nup98Q6PFD9 Actl10-202ENSMUST00000226583 1501 ntBASIC20.82■□□□□ 0.92
Nup98Q6PFD9 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nup98Q6PFD9 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nup98Q6PFD9 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nup98Q6PFD9 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nup98Q6PFD9 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Nup98Q6PFD9 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC20.82■□□□□ 0.92
Nup98Q6PFD9 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nup98Q6PFD9 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nup98Q6PFD9 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nup98Q6PFD9 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC20.82■□□□□ 0.92
Nup98Q6PFD9 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nup98Q6PFD9 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nup98Q6PFD9 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Nup98Q6PFD9 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nup98Q6PFD9 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nup98Q6PFD9 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Nup98Q6PFD9 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nup98Q6PFD9 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nup98Q6PFD9 Gm7284-201ENSMUST00000131667 944 ntBASIC20.81■□□□□ 0.92
Nup98Q6PFD9 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC20.81■□□□□ 0.92
Nup98Q6PFD9 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nup98Q6PFD9 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
Nup98Q6PFD9 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nup98Q6PFD9 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nup98Q6PFD9 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nup98Q6PFD9 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nup98Q6PFD9 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nup98Q6PFD9 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nup98Q6PFD9 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Nup98Q6PFD9 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Nup98Q6PFD9 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nup98Q6PFD9 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Nup98Q6PFD9 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Nup98Q6PFD9 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Nup98Q6PFD9 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nup98Q6PFD9 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Nup98Q6PFD9 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Nup98Q6PFD9 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC20.8■□□□□ 0.92
Nup98Q6PFD9 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
Nup98Q6PFD9 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nup98Q6PFD9 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nup98Q6PFD9 Gm5828-201ENSMUST00000071842 1860 ntBASIC20.79■□□□□ 0.92
Nup98Q6PFD9 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nup98Q6PFD9 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Nup98Q6PFD9 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nup98Q6PFD9 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nup98Q6PFD9 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nup98Q6PFD9 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Nup98Q6PFD9 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nup98Q6PFD9 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nup98Q6PFD9 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC20.78■□□□□ 0.92
Nup98Q6PFD9 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Nup98Q6PFD9 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nup98Q6PFD9 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nup98Q6PFD9 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nup98Q6PFD9 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC20.78■□□□□ 0.92
Nup98Q6PFD9 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nup98Q6PFD9 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nup98Q6PFD9 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Nup98Q6PFD9 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nup98Q6PFD9 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nup98Q6PFD9 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nup98Q6PFD9 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Nup98Q6PFD9 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nup98Q6PFD9 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
Nup98Q6PFD9 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC20.77■□□□□ 0.92
Nup98Q6PFD9 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Nup98Q6PFD9 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nup98Q6PFD9 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Nup98Q6PFD9 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nup98Q6PFD9 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nup98Q6PFD9 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Nup98Q6PFD9 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC20.77■□□□□ 0.92
Nup98Q6PFD9 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC20.77■□□□□ 0.92
Nup98Q6PFD9 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nup98Q6PFD9 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nup98Q6PFD9 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Nup98Q6PFD9 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
Nup98Q6PFD9 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Nup98Q6PFD9 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nup98Q6PFD9 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nup98Q6PFD9 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Nup98Q6PFD9 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Nup98Q6PFD9 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nup98Q6PFD9 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nup98Q6PFD9 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nup98Q6PFD9 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Nup98Q6PFD9 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Nup98Q6PFD9 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Nup98Q6PFD9 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Nup98Q6PFD9 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nup98Q6PFD9 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC20.75■□□□□ 0.91
Nup98Q6PFD9 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nup98Q6PFD9 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Nup98Q6PFD9 Gm21559-201ENSMUST00000220638 855 ntBASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms