Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.41■□□□□ 0.54
Hmgb4Q6P8W9 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hmgb4Q6P8W9 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.41■□□□□ 0.54
Hmgb4Q6P8W9 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.41■□□□□ 0.54
Hmgb4Q6P8W9 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.41■□□□□ 0.54
Hmgb4Q6P8W9 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Hmgb4Q6P8W9 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Hmgb4Q6P8W9 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hmgb4Q6P8W9 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Hmgb4Q6P8W9 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hmgb4Q6P8W9 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hmgb4Q6P8W9 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hmgb4Q6P8W9 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hmgb4Q6P8W9 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hmgb4Q6P8W9 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hmgb4Q6P8W9 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hmgb4Q6P8W9 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hmgb4Q6P8W9 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hmgb4Q6P8W9 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hmgb4Q6P8W9 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hmgb4Q6P8W9 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Hmgb4Q6P8W9 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Hmgb4Q6P8W9 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.4■□□□□ 0.54
Hmgb4Q6P8W9 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Hmgb4Q6P8W9 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Hmgb4Q6P8W9 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hmgb4Q6P8W9 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hmgb4Q6P8W9 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hmgb4Q6P8W9 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hmgb4Q6P8W9 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
Hmgb4Q6P8W9 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Hmgb4Q6P8W9 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hmgb4Q6P8W9 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Hmgb4Q6P8W9 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.39■□□□□ 0.53
Hmgb4Q6P8W9 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.39■□□□□ 0.53
Hmgb4Q6P8W9 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC18.39■□□□□ 0.53
Hmgb4Q6P8W9 Gm21814-202ENSMUST00000203277 873 ntBASIC18.39■□□□□ 0.53
Hmgb4Q6P8W9 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Hmgb4Q6P8W9 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Hmgb4Q6P8W9 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hmgb4Q6P8W9 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.39■□□□□ 0.53
Hmgb4Q6P8W9 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Hmgb4Q6P8W9 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hmgb4Q6P8W9 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hmgb4Q6P8W9 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hmgb4Q6P8W9 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Hmgb4Q6P8W9 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hmgb4Q6P8W9 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hmgb4Q6P8W9 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Hmgb4Q6P8W9 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.38■□□□□ 0.53
Hmgb4Q6P8W9 Gm10231-201ENSMUST00000181584 441 ntBASIC18.38■□□□□ 0.53
Hmgb4Q6P8W9 Mir6349-201ENSMUST00000184059 97 ntBASIC18.38■□□□□ 0.53
Hmgb4Q6P8W9 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hmgb4Q6P8W9 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Hmgb4Q6P8W9 Gm10175-202ENSMUST00000208752 441 ntBASIC18.38■□□□□ 0.53
Hmgb4Q6P8W9 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hmgb4Q6P8W9 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hmgb4Q6P8W9 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hmgb4Q6P8W9 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Hmgb4Q6P8W9 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.38■□□□□ 0.53
Hmgb4Q6P8W9 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hmgb4Q6P8W9 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.38■□□□□ 0.53
Hmgb4Q6P8W9 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.38■□□□□ 0.53
Hmgb4Q6P8W9 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hmgb4Q6P8W9 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hmgb4Q6P8W9 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hmgb4Q6P8W9 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hmgb4Q6P8W9 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Hmgb4Q6P8W9 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hmgb4Q6P8W9 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hmgb4Q6P8W9 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hmgb4Q6P8W9 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hmgb4Q6P8W9 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hmgb4Q6P8W9 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hmgb4Q6P8W9 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hmgb4Q6P8W9 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Hmgb4Q6P8W9 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hmgb4Q6P8W9 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hmgb4Q6P8W9 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Hmgb4Q6P8W9 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Hmgb4Q6P8W9 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hmgb4Q6P8W9 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Hmgb4Q6P8W9 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hmgb4Q6P8W9 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hmgb4Q6P8W9 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.36■□□□□ 0.53
Hmgb4Q6P8W9 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.36■□□□□ 0.53
Hmgb4Q6P8W9 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Hmgb4Q6P8W9 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Hmgb4Q6P8W9 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.36■□□□□ 0.53
Hmgb4Q6P8W9 Timm23-208ENSMUST00000226683 750 ntBASIC18.36■□□□□ 0.53
Hmgb4Q6P8W9 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hmgb4Q6P8W9 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hmgb4Q6P8W9 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Hmgb4Q6P8W9 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Hmgb4Q6P8W9 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Hmgb4Q6P8W9 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hmgb4Q6P8W9 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Hmgb4Q6P8W9 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hmgb4Q6P8W9 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.35■□□□□ 0.53
Hmgb4Q6P8W9 Gm11539-201ENSMUST00000119837 557 ntBASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms