Protein–RNA interactions for Protein: Q6NZM9

Hdac4, Histone deacetylase 4, mousemouse

Predictions only

Length 1,076 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac4Q6NZM9 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hdac4Q6NZM9 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hdac4Q6NZM9 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Hdac4Q6NZM9 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hdac4Q6NZM9 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Hdac4Q6NZM9 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC19.69■□□□□ 0.74
Hdac4Q6NZM9 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC19.69■□□□□ 0.74
Hdac4Q6NZM9 AC166341.7-201ENSMUST00000221698 126 ntBASIC19.69■□□□□ 0.74
Hdac4Q6NZM9 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hdac4Q6NZM9 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Hdac4Q6NZM9 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hdac4Q6NZM9 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hdac4Q6NZM9 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Hdac4Q6NZM9 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Hdac4Q6NZM9 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hdac4Q6NZM9 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC19.68■□□□□ 0.74
Hdac4Q6NZM9 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hdac4Q6NZM9 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hdac4Q6NZM9 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC19.68■□□□□ 0.74
Hdac4Q6NZM9 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Hdac4Q6NZM9 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Hdac4Q6NZM9 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.68■□□□□ 0.74
Hdac4Q6NZM9 Gm18666-201ENSMUST00000190039 958 ntBASIC19.68■□□□□ 0.74
Hdac4Q6NZM9 Gm42545-201ENSMUST00000202755 922 ntBASIC19.68■□□□□ 0.74
Hdac4Q6NZM9 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Hdac4Q6NZM9 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Hdac4Q6NZM9 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
Hdac4Q6NZM9 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hdac4Q6NZM9 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hdac4Q6NZM9 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hdac4Q6NZM9 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hdac4Q6NZM9 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hdac4Q6NZM9 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
Hdac4Q6NZM9 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hdac4Q6NZM9 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC19.68■□□□□ 0.74
Hdac4Q6NZM9 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hdac4Q6NZM9 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Hdac4Q6NZM9 AC125311.2-201ENSMUST00000227477 1940 ntBASIC19.67■□□□□ 0.74
Hdac4Q6NZM9 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Hdac4Q6NZM9 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.67■□□□□ 0.74
Hdac4Q6NZM9 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Hdac4Q6NZM9 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Hdac4Q6NZM9 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.67■□□□□ 0.74
Hdac4Q6NZM9 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hdac4Q6NZM9 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hdac4Q6NZM9 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hdac4Q6NZM9 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hdac4Q6NZM9 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Hdac4Q6NZM9 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hdac4Q6NZM9 Gm37519-201ENSMUST00000191687 2210 ntBASIC19.67■□□□□ 0.74
Hdac4Q6NZM9 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hdac4Q6NZM9 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC19.67■□□□□ 0.74
Hdac4Q6NZM9 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hdac4Q6NZM9 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Hdac4Q6NZM9 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hdac4Q6NZM9 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hdac4Q6NZM9 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hdac4Q6NZM9 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hdac4Q6NZM9 Gm6598-201ENSMUST00000202719 2615 ntBASIC19.66■□□□□ 0.74
Hdac4Q6NZM9 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.66■□□□□ 0.74
Hdac4Q6NZM9 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Hdac4Q6NZM9 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hdac4Q6NZM9 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC19.66■□□□□ 0.74
Hdac4Q6NZM9 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.66■□□□□ 0.74
Hdac4Q6NZM9 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.66■□□□□ 0.74
Hdac4Q6NZM9 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.66■□□□□ 0.74
Hdac4Q6NZM9 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hdac4Q6NZM9 Gm43808-201ENSMUST00000202534 2065 ntBASIC19.66■□□□□ 0.74
Hdac4Q6NZM9 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hdac4Q6NZM9 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Hdac4Q6NZM9 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Hdac4Q6NZM9 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hdac4Q6NZM9 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hdac4Q6NZM9 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hdac4Q6NZM9 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hdac4Q6NZM9 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hdac4Q6NZM9 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hdac4Q6NZM9 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC19.65■□□□□ 0.74
Hdac4Q6NZM9 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hdac4Q6NZM9 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hdac4Q6NZM9 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hdac4Q6NZM9 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hdac4Q6NZM9 Nrn1-203ENSMUST00000223611 1443 ntBASIC19.65■□□□□ 0.74
Hdac4Q6NZM9 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hdac4Q6NZM9 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hdac4Q6NZM9 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Hdac4Q6NZM9 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
Hdac4Q6NZM9 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Hdac4Q6NZM9 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Hdac4Q6NZM9 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hdac4Q6NZM9 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Hdac4Q6NZM9 H2-K2-201ENSMUST00000174250 1049 ntBASIC19.64■□□□□ 0.73
Hdac4Q6NZM9 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Hdac4Q6NZM9 Gm37292-201ENSMUST00000192062 758 ntBASIC19.64■□□□□ 0.73
Hdac4Q6NZM9 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC19.64■□□□□ 0.73
Hdac4Q6NZM9 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Hdac4Q6NZM9 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hdac4Q6NZM9 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hdac4Q6NZM9 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Hdac4Q6NZM9 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms