Protein–RNA interactions for Protein: Q6IFX3

Krt40, Keratin, type I cytoskeletal 40, mousemouse

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt40Q6IFX3 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Krt40Q6IFX3 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Krt40Q6IFX3 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Krt40Q6IFX3 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Krt40Q6IFX3 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Krt40Q6IFX3 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Krt40Q6IFX3 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Krt40Q6IFX3 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Krt40Q6IFX3 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Krt40Q6IFX3 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Krt40Q6IFX3 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Krt40Q6IFX3 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Krt40Q6IFX3 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Krt40Q6IFX3 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC20.74■□□□□ 0.91
Krt40Q6IFX3 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Krt40Q6IFX3 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Krt40Q6IFX3 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Krt40Q6IFX3 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Krt40Q6IFX3 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.74■□□□□ 0.91
Krt40Q6IFX3 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Krt40Q6IFX3 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Krt40Q6IFX3 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Krt40Q6IFX3 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC20.74■□□□□ 0.91
Krt40Q6IFX3 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Krt40Q6IFX3 Gm9731-201ENSMUST00000209480 747 ntBASIC20.73■□□□□ 0.91
Krt40Q6IFX3 Il3ra-202ENSMUST00000223589 738 ntBASIC20.73■□□□□ 0.91
Krt40Q6IFX3 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Krt40Q6IFX3 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Krt40Q6IFX3 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Krt40Q6IFX3 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Krt40Q6IFX3 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Krt40Q6IFX3 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Krt40Q6IFX3 Gm5828-201ENSMUST00000071842 1860 ntBASIC20.72■□□□□ 0.91
Krt40Q6IFX3 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Krt40Q6IFX3 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Krt40Q6IFX3 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Krt40Q6IFX3 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Krt40Q6IFX3 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Krt40Q6IFX3 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Krt40Q6IFX3 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Krt40Q6IFX3 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Krt40Q6IFX3 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Krt40Q6IFX3 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Krt40Q6IFX3 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Krt40Q6IFX3 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Krt40Q6IFX3 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Krt40Q6IFX3 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Krt40Q6IFX3 Mir5130-201ENSMUST00000175160 84 ntBASIC20.71■□□□□ 0.91
Krt40Q6IFX3 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC20.71■□□□□ 0.91
Krt40Q6IFX3 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC20.71■□□□□ 0.91
Krt40Q6IFX3 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Krt40Q6IFX3 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
Krt40Q6IFX3 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Krt40Q6IFX3 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Krt40Q6IFX3 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Krt40Q6IFX3 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Krt40Q6IFX3 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC20.7■□□□□ 0.9
Krt40Q6IFX3 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Krt40Q6IFX3 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Krt40Q6IFX3 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Krt40Q6IFX3 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC20.7■□□□□ 0.9
Krt40Q6IFX3 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Krt40Q6IFX3 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.69■□□□□ 0.9
Krt40Q6IFX3 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Krt40Q6IFX3 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Krt40Q6IFX3 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Krt40Q6IFX3 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Krt40Q6IFX3 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Krt40Q6IFX3 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Krt40Q6IFX3 Gm17661-201ENSMUST00000170317 270 ntBASIC20.69■□□□□ 0.9
Krt40Q6IFX3 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC20.69■□□□□ 0.9
Krt40Q6IFX3 Gm18032-201ENSMUST00000222541 538 ntBASIC20.69■□□□□ 0.9
Krt40Q6IFX3 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Krt40Q6IFX3 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Krt40Q6IFX3 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Krt40Q6IFX3 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Krt40Q6IFX3 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC20.68■□□□□ 0.9
Krt40Q6IFX3 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Krt40Q6IFX3 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Krt40Q6IFX3 AC120002.2-201ENSMUST00000220205 773 ntBASIC20.68■□□□□ 0.9
Krt40Q6IFX3 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Krt40Q6IFX3 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Krt40Q6IFX3 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Krt40Q6IFX3 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Krt40Q6IFX3 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Krt40Q6IFX3 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Krt40Q6IFX3 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Krt40Q6IFX3 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Krt40Q6IFX3 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Krt40Q6IFX3 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC20.67■□□□□ 0.9
Krt40Q6IFX3 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Krt40Q6IFX3 Gm16061-201ENSMUST00000122167 857 ntBASIC20.67■□□□□ 0.9
Krt40Q6IFX3 Gm6659-201ENSMUST00000174752 547 ntBASIC20.67■□□□□ 0.9
Krt40Q6IFX3 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC20.67■□□□□ 0.9
Krt40Q6IFX3 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Krt40Q6IFX3 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC20.67■□□□□ 0.9
Krt40Q6IFX3 Grk6-206ENSMUST00000224995 2971 ntBASIC20.67■□□□□ 0.9
Krt40Q6IFX3 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC20.67■□□□□ 0.9
Krt40Q6IFX3 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC20.67■□□□□ 0.9
Krt40Q6IFX3 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms