Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Ecm1Q61508 Gm3272-201ENSMUST00000181181 1229 ntBASIC19.52■□□□□ 0.72
Ecm1Q61508 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Ecm1Q61508 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC19.52■□□□□ 0.72
Ecm1Q61508 Gm10566-201ENSMUST00000086739 996 ntBASIC19.52■□□□□ 0.72
Ecm1Q61508 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ecm1Q61508 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ecm1Q61508 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
Ecm1Q61508 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
Ecm1Q61508 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ecm1Q61508 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ecm1Q61508 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ecm1Q61508 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ecm1Q61508 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ecm1Q61508 Golph3-205ENSMUST00000228671 2842 ntBASIC19.51■□□□□ 0.71
Ecm1Q61508 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC19.51■□□□□ 0.71
Ecm1Q61508 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ecm1Q61508 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
Ecm1Q61508 Gm28033-201ENSMUST00000184224 96 ntBASIC19.51■□□□□ 0.71
Ecm1Q61508 Gm17807-201ENSMUST00000186869 298 ntBASIC19.51■□□□□ 0.71
Ecm1Q61508 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC19.51■□□□□ 0.71
Ecm1Q61508 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Ecm1Q61508 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ecm1Q61508 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC19.51■□□□□ 0.71
Ecm1Q61508 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ecm1Q61508 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ecm1Q61508 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Ecm1Q61508 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ecm1Q61508 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ecm1Q61508 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ecm1Q61508 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.5■□□□□ 0.71
Ecm1Q61508 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ecm1Q61508 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ecm1Q61508 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ecm1Q61508 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC19.5■□□□□ 0.71
Ecm1Q61508 AC130713.1-201ENSMUST00000228853 1096 ntBASIC19.5■□□□□ 0.71
Ecm1Q61508 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ecm1Q61508 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ecm1Q61508 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ecm1Q61508 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.5■□□□□ 0.71
Ecm1Q61508 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ecm1Q61508 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ecm1Q61508 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Ecm1Q61508 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Ecm1Q61508 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ecm1Q61508 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ecm1Q61508 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC19.49■□□□□ 0.71
Ecm1Q61508 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ecm1Q61508 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ecm1Q61508 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ecm1Q61508 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ecm1Q61508 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
Ecm1Q61508 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ecm1Q61508 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ecm1Q61508 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ecm1Q61508 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ecm1Q61508 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ecm1Q61508 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ecm1Q61508 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ecm1Q61508 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ecm1Q61508 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.48■□□□□ 0.71
Ecm1Q61508 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Ecm1Q61508 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.48■□□□□ 0.71
Ecm1Q61508 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Ecm1Q61508 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
Ecm1Q61508 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ecm1Q61508 Gm11950-201ENSMUST00000121615 838 ntBASIC19.48■□□□□ 0.71
Ecm1Q61508 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC19.48■□□□□ 0.71
Ecm1Q61508 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ecm1Q61508 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ecm1Q61508 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ecm1Q61508 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ecm1Q61508 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ecm1Q61508 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ecm1Q61508 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Ecm1Q61508 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.47■□□□□ 0.71
Ecm1Q61508 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ecm1Q61508 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ecm1Q61508 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ecm1Q61508 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ecm1Q61508 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ecm1Q61508 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ecm1Q61508 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ecm1Q61508 Gm18958-201ENSMUST00000174258 762 ntBASIC19.47■□□□□ 0.71
Ecm1Q61508 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Ecm1Q61508 Gm18669-201ENSMUST00000216049 778 ntBASIC19.47■□□□□ 0.71
Ecm1Q61508 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ecm1Q61508 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ecm1Q61508 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ecm1Q61508 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ecm1Q61508 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Ecm1Q61508 Actl10-202ENSMUST00000226583 1501 ntBASIC19.46■□□□□ 0.71
Ecm1Q61508 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ecm1Q61508 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Ecm1Q61508 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ecm1Q61508 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC19.46■□□□□ 0.71
Ecm1Q61508 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ecm1Q61508 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Ecm1Q61508 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC19.46■□□□□ 0.71
Ecm1Q61508 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC19.46■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms