Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Vsx2Q61412 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vsx2Q61412 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vsx2Q61412 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vsx2Q61412 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vsx2Q61412 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Vsx2Q61412 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vsx2Q61412 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Vsx2Q61412 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
Vsx2Q61412 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vsx2Q61412 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Vsx2Q61412 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vsx2Q61412 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.12■□□□□ 0.33
Vsx2Q61412 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vsx2Q61412 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Vsx2Q61412 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vsx2Q61412 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
Vsx2Q61412 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vsx2Q61412 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Vsx2Q61412 Gm13158-201ENSMUST00000122007 736 ntBASIC17.12■□□□□ 0.33
Vsx2Q61412 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.12■□□□□ 0.33
Vsx2Q61412 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Vsx2Q61412 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Vsx2Q61412 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vsx2Q61412 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vsx2Q61412 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Vsx2Q61412 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Vsx2Q61412 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vsx2Q61412 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vsx2Q61412 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vsx2Q61412 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vsx2Q61412 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Vsx2Q61412 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vsx2Q61412 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vsx2Q61412 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Vsx2Q61412 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vsx2Q61412 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vsx2Q61412 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vsx2Q61412 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vsx2Q61412 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.11■□□□□ 0.33
Vsx2Q61412 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.11■□□□□ 0.33
Vsx2Q61412 Gm5643-201ENSMUST00000117081 966 ntBASIC17.11■□□□□ 0.33
Vsx2Q61412 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vsx2Q61412 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Vsx2Q61412 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.11■□□□□ 0.33
Vsx2Q61412 Gm18666-201ENSMUST00000190039 958 ntBASIC17.11■□□□□ 0.33
Vsx2Q61412 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vsx2Q61412 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vsx2Q61412 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vsx2Q61412 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Vsx2Q61412 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vsx2Q61412 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vsx2Q61412 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vsx2Q61412 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vsx2Q61412 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Vsx2Q61412 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.1■□□□□ 0.33
Vsx2Q61412 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vsx2Q61412 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.1■□□□□ 0.33
Vsx2Q61412 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vsx2Q61412 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vsx2Q61412 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vsx2Q61412 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Vsx2Q61412 Gm38285-201ENSMUST00000192928 922 ntBASIC17.1■□□□□ 0.33
Vsx2Q61412 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vsx2Q61412 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Vsx2Q61412 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Vsx2Q61412 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vsx2Q61412 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vsx2Q61412 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Vsx2Q61412 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Vsx2Q61412 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.1■□□□□ 0.33
Vsx2Q61412 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vsx2Q61412 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vsx2Q61412 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Vsx2Q61412 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Vsx2Q61412 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.09■□□□□ 0.33
Vsx2Q61412 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vsx2Q61412 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Vsx2Q61412 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.09■□□□□ 0.33
Vsx2Q61412 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.09■□□□□ 0.33
Vsx2Q61412 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Vsx2Q61412 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vsx2Q61412 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vsx2Q61412 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Vsx2Q61412 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
Vsx2Q61412 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Vsx2Q61412 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Vsx2Q61412 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Vsx2Q61412 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Vsx2Q61412 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vsx2Q61412 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Vsx2Q61412 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vsx2Q61412 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.08■□□□□ 0.32
Vsx2Q61412 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.08■□□□□ 0.32
Vsx2Q61412 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.08■□□□□ 0.32
Vsx2Q61412 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
Vsx2Q61412 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Vsx2Q61412 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Vsx2Q61412 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vsx2Q61412 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms