Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC25.45■■□□□ 1.66
Ptch1Q61115 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC25.45■■□□□ 1.66
Ptch1Q61115 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Ptch1Q61115 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Ptch1Q61115 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC25.45■■□□□ 1.66
Ptch1Q61115 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC25.45■■□□□ 1.66
Ptch1Q61115 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC25.45■■□□□ 1.66
Ptch1Q61115 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC25.44■■□□□ 1.66
Ptch1Q61115 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Ptch1Q61115 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Ptch1Q61115 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
Ptch1Q61115 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC25.44■■□□□ 1.66
Ptch1Q61115 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Ptch1Q61115 Gm10052-201ENSMUST00000168019 960 ntBASIC25.44■■□□□ 1.66
Ptch1Q61115 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC25.44■■□□□ 1.66
Ptch1Q61115 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC25.44■■□□□ 1.66
Ptch1Q61115 Gm7729-201ENSMUST00000050143 801 ntBASIC25.44■■□□□ 1.66
Ptch1Q61115 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Ptch1Q61115 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Ptch1Q61115 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC25.43■■□□□ 1.66
Ptch1Q61115 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Ptch1Q61115 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Ptch1Q61115 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Ptch1Q61115 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC25.43■■□□□ 1.66
Ptch1Q61115 Gm9449-201ENSMUST00000207265 1011 ntBASIC25.43■■□□□ 1.66
Ptch1Q61115 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC25.43■■□□□ 1.66
Ptch1Q61115 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Ptch1Q61115 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC25.43■■□□□ 1.66
Ptch1Q61115 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Ptch1Q61115 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Ptch1Q61115 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Ptch1Q61115 Gm9885-202ENSMUST00000186234 2209 ntBASIC25.43■■□□□ 1.66
Ptch1Q61115 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
Ptch1Q61115 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Ptch1Q61115 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Ptch1Q61115 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Ptch1Q61115 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Ptch1Q61115 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Ptch1Q61115 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Ptch1Q61115 Gm2651-201ENSMUST00000203560 838 ntBASIC25.42■■□□□ 1.66
Ptch1Q61115 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC25.42■■□□□ 1.66
Ptch1Q61115 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Ptch1Q61115 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Ptch1Q61115 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Ptch1Q61115 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Ptch1Q61115 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
Ptch1Q61115 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
Ptch1Q61115 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC25.41■■□□□ 1.66
Ptch1Q61115 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC25.41■■□□□ 1.66
Ptch1Q61115 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC25.41■■□□□ 1.66
Ptch1Q61115 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC25.41■■□□□ 1.66
Ptch1Q61115 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC25.41■■□□□ 1.66
Ptch1Q61115 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Ptch1Q61115 Gm18195-201ENSMUST00000207604 706 ntBASIC25.4■■□□□ 1.66
Ptch1Q61115 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
Ptch1Q61115 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC25.4■■□□□ 1.66
Ptch1Q61115 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Ptch1Q61115 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Ptch1Q61115 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC25.39■■□□□ 1.66
Ptch1Q61115 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC25.39■■□□□ 1.66
Ptch1Q61115 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
Ptch1Q61115 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
Ptch1Q61115 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Ptch1Q61115 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.66
Ptch1Q61115 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Ptch1Q61115 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Ptch1Q61115 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
Ptch1Q61115 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Ptch1Q61115 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Ptch1Q61115 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC25.38■■□□□ 1.65
Ptch1Q61115 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC25.38■■□□□ 1.65
Ptch1Q61115 AC161829.1-201ENSMUST00000220298 281 ntBASIC25.38■■□□□ 1.65
Ptch1Q61115 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Ptch1Q61115 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Ptch1Q61115 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Ptch1Q61115 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Ptch1Q61115 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC25.37■■□□□ 1.65
Ptch1Q61115 AC125350.1-201ENSMUST00000225115 903 ntBASIC25.37■■□□□ 1.65
Ptch1Q61115 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC25.37■■□□□ 1.65
Ptch1Q61115 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
Ptch1Q61115 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Ptch1Q61115 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Ptch1Q61115 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Ptch1Q61115 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
Ptch1Q61115 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
Ptch1Q61115 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
Ptch1Q61115 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Ptch1Q61115 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Ptch1Q61115 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
Ptch1Q61115 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC25.37■■□□□ 1.65
Ptch1Q61115 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Ptch1Q61115 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Ptch1Q61115 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Ptch1Q61115 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Ptch1Q61115 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Ptch1Q61115 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Ptch1Q61115 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
Ptch1Q61115 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
Ptch1Q61115 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
Ptch1Q61115 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms