Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC13.72□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC13.72□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC13.72□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC13.71□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Gm13146-201ENSMUST00000118508 780 ntBASIC13.71□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC13.71□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Gm13241-201ENSMUST00000094493 780 ntBASIC13.71□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC13.71□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC13.71□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC13.7□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC13.7□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC13.7□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC13.7□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Gm13534-201ENSMUST00000121169 513 ntBASIC13.69□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC13.69□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC13.69□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC13.69□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC13.68□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC13.68□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav15-1-dv6-1Q5R1D2 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms