Protein–RNA interactions for Protein: Q5ND28

Scarf1, Scavenger receptor class F member 1, mousemouse

Predictions only

Length 820 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarf1Q5ND28 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scarf1Q5ND28 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Scarf1Q5ND28 Gm12085-201ENSMUST00000119263 940 ntBASIC19.25■□□□□ 0.67
Scarf1Q5ND28 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Scarf1Q5ND28 Gm37055-201ENSMUST00000191866 133 ntBASIC19.25■□□□□ 0.67
Scarf1Q5ND28 Arhgef4-208ENSMUST00000211073 171 ntBASIC19.25■□□□□ 0.67
Scarf1Q5ND28 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scarf1Q5ND28 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scarf1Q5ND28 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Scarf1Q5ND28 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scarf1Q5ND28 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scarf1Q5ND28 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scarf1Q5ND28 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Scarf1Q5ND28 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.24■□□□□ 0.67
Scarf1Q5ND28 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.24■□□□□ 0.67
Scarf1Q5ND28 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scarf1Q5ND28 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC19.24■□□□□ 0.67
Scarf1Q5ND28 Gm9694-201ENSMUST00000193347 1189 ntBASIC19.24■□□□□ 0.67
Scarf1Q5ND28 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Scarf1Q5ND28 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scarf1Q5ND28 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scarf1Q5ND28 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scarf1Q5ND28 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scarf1Q5ND28 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scarf1Q5ND28 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scarf1Q5ND28 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scarf1Q5ND28 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC19.23■□□□□ 0.67
Scarf1Q5ND28 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scarf1Q5ND28 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Scarf1Q5ND28 Gm24841-201ENSMUST00000158676 357 ntBASIC19.23■□□□□ 0.67
Scarf1Q5ND28 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scarf1Q5ND28 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC19.23■□□□□ 0.67
Scarf1Q5ND28 Gm3375-201ENSMUST00000203929 796 ntBASIC19.23■□□□□ 0.67
Scarf1Q5ND28 Timm23-208ENSMUST00000226683 750 ntBASIC19.23■□□□□ 0.67
Scarf1Q5ND28 AC156016.1-201ENSMUST00000227190 1035 ntBASIC19.23■□□□□ 0.67
Scarf1Q5ND28 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scarf1Q5ND28 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Scarf1Q5ND28 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Scarf1Q5ND28 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scarf1Q5ND28 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scarf1Q5ND28 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scarf1Q5ND28 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scarf1Q5ND28 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Scarf1Q5ND28 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC19.22■□□□□ 0.67
Scarf1Q5ND28 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scarf1Q5ND28 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scarf1Q5ND28 Mir7071-201ENSMUST00000184847 69 ntBASIC19.22■□□□□ 0.67
Scarf1Q5ND28 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scarf1Q5ND28 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Scarf1Q5ND28 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scarf1Q5ND28 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scarf1Q5ND28 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scarf1Q5ND28 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scarf1Q5ND28 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scarf1Q5ND28 AC125311.2-201ENSMUST00000227477 1940 ntBASIC19.21■□□□□ 0.67
Scarf1Q5ND28 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Scarf1Q5ND28 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scarf1Q5ND28 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scarf1Q5ND28 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Scarf1Q5ND28 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Scarf1Q5ND28 Odf3b-204ENSMUST00000227834 930 ntBASIC19.21■□□□□ 0.67
Scarf1Q5ND28 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scarf1Q5ND28 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Scarf1Q5ND28 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scarf1Q5ND28 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scarf1Q5ND28 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC19.21■□□□□ 0.67
Scarf1Q5ND28 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scarf1Q5ND28 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC19.2■□□□□ 0.66
Scarf1Q5ND28 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC19.2■□□□□ 0.66
Scarf1Q5ND28 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scarf1Q5ND28 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC19.2■□□□□ 0.66
Scarf1Q5ND28 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scarf1Q5ND28 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.19■□□□□ 0.66
Scarf1Q5ND28 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Scarf1Q5ND28 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scarf1Q5ND28 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scarf1Q5ND28 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scarf1Q5ND28 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC19.19■□□□□ 0.66
Scarf1Q5ND28 Mir6982-201ENSMUST00000184354 68 ntBASIC19.19■□□□□ 0.66
Scarf1Q5ND28 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC19.19■□□□□ 0.66
Scarf1Q5ND28 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Scarf1Q5ND28 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Scarf1Q5ND28 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scarf1Q5ND28 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scarf1Q5ND28 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Scarf1Q5ND28 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Scarf1Q5ND28 Gm5417-201ENSMUST00000079706 384 ntBASIC19.19■□□□□ 0.66
Scarf1Q5ND28 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scarf1Q5ND28 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Scarf1Q5ND28 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scarf1Q5ND28 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scarf1Q5ND28 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Scarf1Q5ND28 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Scarf1Q5ND28 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scarf1Q5ND28 Gm20472-201ENSMUST00000174403 1240 ntBASIC19.18■□□□□ 0.66
Scarf1Q5ND28 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC19.18■□□□□ 0.66
Scarf1Q5ND28 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC19.18■□□□□ 0.66
Scarf1Q5ND28 Gm38027-201ENSMUST00000192315 235 ntBASIC19.18■□□□□ 0.66
Scarf1Q5ND28 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC19.18■□□□□ 0.66
Scarf1Q5ND28 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms