Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
R3hdm4Q4VBF2 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
R3hdm4Q4VBF2 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
R3hdm4Q4VBF2 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
R3hdm4Q4VBF2 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
R3hdm4Q4VBF2 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
R3hdm4Q4VBF2 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
R3hdm4Q4VBF2 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
R3hdm4Q4VBF2 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
R3hdm4Q4VBF2 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
R3hdm4Q4VBF2 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.95■□□□□ 0.62
R3hdm4Q4VBF2 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
R3hdm4Q4VBF2 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
R3hdm4Q4VBF2 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
R3hdm4Q4VBF2 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.95■□□□□ 0.62
R3hdm4Q4VBF2 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
R3hdm4Q4VBF2 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
R3hdm4Q4VBF2 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
R3hdm4Q4VBF2 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
R3hdm4Q4VBF2 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
R3hdm4Q4VBF2 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
R3hdm4Q4VBF2 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.95■□□□□ 0.62
R3hdm4Q4VBF2 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
R3hdm4Q4VBF2 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
R3hdm4Q4VBF2 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
R3hdm4Q4VBF2 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.94■□□□□ 0.62
R3hdm4Q4VBF2 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.94■□□□□ 0.62
R3hdm4Q4VBF2 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
R3hdm4Q4VBF2 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
R3hdm4Q4VBF2 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.94■□□□□ 0.62
R3hdm4Q4VBF2 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.94■□□□□ 0.62
R3hdm4Q4VBF2 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.94■□□□□ 0.62
R3hdm4Q4VBF2 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
R3hdm4Q4VBF2 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
R3hdm4Q4VBF2 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
R3hdm4Q4VBF2 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.94■□□□□ 0.62
R3hdm4Q4VBF2 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
R3hdm4Q4VBF2 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
R3hdm4Q4VBF2 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
R3hdm4Q4VBF2 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.94■□□□□ 0.62
R3hdm4Q4VBF2 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
R3hdm4Q4VBF2 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
R3hdm4Q4VBF2 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
R3hdm4Q4VBF2 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
R3hdm4Q4VBF2 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
R3hdm4Q4VBF2 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.93■□□□□ 0.62
R3hdm4Q4VBF2 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
R3hdm4Q4VBF2 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.93■□□□□ 0.62
R3hdm4Q4VBF2 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
R3hdm4Q4VBF2 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
R3hdm4Q4VBF2 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
R3hdm4Q4VBF2 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
R3hdm4Q4VBF2 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
R3hdm4Q4VBF2 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
R3hdm4Q4VBF2 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
R3hdm4Q4VBF2 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
R3hdm4Q4VBF2 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
R3hdm4Q4VBF2 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
R3hdm4Q4VBF2 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.93■□□□□ 0.62
R3hdm4Q4VBF2 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
R3hdm4Q4VBF2 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
R3hdm4Q4VBF2 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
R3hdm4Q4VBF2 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
R3hdm4Q4VBF2 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.92■□□□□ 0.62
R3hdm4Q4VBF2 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.92■□□□□ 0.62
R3hdm4Q4VBF2 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.92■□□□□ 0.62
R3hdm4Q4VBF2 Mir5122-201ENSMUST00000175004 89 ntBASIC18.92■□□□□ 0.62
R3hdm4Q4VBF2 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
R3hdm4Q4VBF2 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
R3hdm4Q4VBF2 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
R3hdm4Q4VBF2 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.92■□□□□ 0.62
R3hdm4Q4VBF2 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
R3hdm4Q4VBF2 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
R3hdm4Q4VBF2 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
R3hdm4Q4VBF2 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.92■□□□□ 0.62
R3hdm4Q4VBF2 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
R3hdm4Q4VBF2 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
R3hdm4Q4VBF2 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
R3hdm4Q4VBF2 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
R3hdm4Q4VBF2 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.91■□□□□ 0.62
R3hdm4Q4VBF2 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
R3hdm4Q4VBF2 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
R3hdm4Q4VBF2 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
R3hdm4Q4VBF2 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
R3hdm4Q4VBF2 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
R3hdm4Q4VBF2 Gm12085-201ENSMUST00000119263 940 ntBASIC18.91■□□□□ 0.62
R3hdm4Q4VBF2 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
R3hdm4Q4VBF2 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
R3hdm4Q4VBF2 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.91■□□□□ 0.62
R3hdm4Q4VBF2 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
R3hdm4Q4VBF2 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.91■□□□□ 0.62
R3hdm4Q4VBF2 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.91■□□□□ 0.62
R3hdm4Q4VBF2 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.91■□□□□ 0.62
R3hdm4Q4VBF2 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
R3hdm4Q4VBF2 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
R3hdm4Q4VBF2 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
R3hdm4Q4VBF2 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
R3hdm4Q4VBF2 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
R3hdm4Q4VBF2 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.91■□□□□ 0.62
R3hdm4Q4VBF2 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms