Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Prpf38aQ4FK66 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Prpf38aQ4FK66 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Prpf38aQ4FK66 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Prpf38aQ4FK66 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Prpf38aQ4FK66 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC20.54■□□□□ 0.88
Prpf38aQ4FK66 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Prpf38aQ4FK66 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Prpf38aQ4FK66 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Prpf38aQ4FK66 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Prpf38aQ4FK66 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC20.54■□□□□ 0.88
Prpf38aQ4FK66 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Prpf38aQ4FK66 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Prpf38aQ4FK66 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Prpf38aQ4FK66 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Prpf38aQ4FK66 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Prpf38aQ4FK66 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Prpf38aQ4FK66 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Prpf38aQ4FK66 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Prpf38aQ4FK66 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Prpf38aQ4FK66 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Prpf38aQ4FK66 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC20.53■□□□□ 0.88
Prpf38aQ4FK66 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Prpf38aQ4FK66 Gm2274-201ENSMUST00000184539 609 ntBASIC20.53■□□□□ 0.88
Prpf38aQ4FK66 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC20.53■□□□□ 0.88
Prpf38aQ4FK66 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Prpf38aQ4FK66 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Prpf38aQ4FK66 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Prpf38aQ4FK66 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Prpf38aQ4FK66 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Prpf38aQ4FK66 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Prpf38aQ4FK66 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Prpf38aQ4FK66 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Prpf38aQ4FK66 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Prpf38aQ4FK66 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC20.52■□□□□ 0.88
Prpf38aQ4FK66 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Prpf38aQ4FK66 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Prpf38aQ4FK66 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Prpf38aQ4FK66 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Prpf38aQ4FK66 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Prpf38aQ4FK66 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Prpf38aQ4FK66 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Prpf38aQ4FK66 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Prpf38aQ4FK66 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Prpf38aQ4FK66 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC20.52■□□□□ 0.88
Prpf38aQ4FK66 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Prpf38aQ4FK66 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Prpf38aQ4FK66 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Prpf38aQ4FK66 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Prpf38aQ4FK66 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC20.51■□□□□ 0.87
Prpf38aQ4FK66 Gm45058-201ENSMUST00000205810 766 ntBASIC20.51■□□□□ 0.87
Prpf38aQ4FK66 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Prpf38aQ4FK66 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Prpf38aQ4FK66 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC20.51■□□□□ 0.87
Prpf38aQ4FK66 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Prpf38aQ4FK66 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
Prpf38aQ4FK66 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Prpf38aQ4FK66 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Prpf38aQ4FK66 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Prpf38aQ4FK66 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Prpf38aQ4FK66 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Prpf38aQ4FK66 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Prpf38aQ4FK66 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Prpf38aQ4FK66 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Prpf38aQ4FK66 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Prpf38aQ4FK66 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Prpf38aQ4FK66 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Prpf38aQ4FK66 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Prpf38aQ4FK66 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Prpf38aQ4FK66 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC20.49■□□□□ 0.87
Prpf38aQ4FK66 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Prpf38aQ4FK66 Gm7791-201ENSMUST00000219066 539 ntBASIC20.49■□□□□ 0.87
Prpf38aQ4FK66 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Prpf38aQ4FK66 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Prpf38aQ4FK66 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Prpf38aQ4FK66 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC20.49■□□□□ 0.87
Prpf38aQ4FK66 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Prpf38aQ4FK66 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Prpf38aQ4FK66 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Prpf38aQ4FK66 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Prpf38aQ4FK66 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Prpf38aQ4FK66 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Prpf38aQ4FK66 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Prpf38aQ4FK66 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Prpf38aQ4FK66 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Prpf38aQ4FK66 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC20.48■□□□□ 0.87
Prpf38aQ4FK66 Gm4217-201ENSMUST00000182243 1002 ntBASIC20.48■□□□□ 0.87
Prpf38aQ4FK66 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Prpf38aQ4FK66 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Prpf38aQ4FK66 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Prpf38aQ4FK66 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
Prpf38aQ4FK66 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Prpf38aQ4FK66 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Prpf38aQ4FK66 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Prpf38aQ4FK66 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Prpf38aQ4FK66 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Prpf38aQ4FK66 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Prpf38aQ4FK66 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Prpf38aQ4FK66 Mir5130-201ENSMUST00000175160 84 ntBASIC20.47■□□□□ 0.87
Prpf38aQ4FK66 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms