Protein–RNA interactions for Protein: Q3UQU0

Brd9, Bromodomain-containing protein 9, mousemouse

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brd9Q3UQU0 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Brd9Q3UQU0 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Brd9Q3UQU0 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Brd9Q3UQU0 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC19.69■□□□□ 0.74
Brd9Q3UQU0 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Brd9Q3UQU0 Mir8112-201ENSMUST00000184382 131 ntBASIC19.69■□□□□ 0.74
Brd9Q3UQU0 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC19.69■□□□□ 0.74
Brd9Q3UQU0 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Brd9Q3UQU0 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Brd9Q3UQU0 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC19.69■□□□□ 0.74
Brd9Q3UQU0 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Brd9Q3UQU0 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Brd9Q3UQU0 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Brd9Q3UQU0 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Brd9Q3UQU0 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Brd9Q3UQU0 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Brd9Q3UQU0 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Brd9Q3UQU0 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Brd9Q3UQU0 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Brd9Q3UQU0 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Brd9Q3UQU0 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Brd9Q3UQU0 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC19.68■□□□□ 0.74
Brd9Q3UQU0 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Brd9Q3UQU0 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC19.68■□□□□ 0.74
Brd9Q3UQU0 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Brd9Q3UQU0 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Brd9Q3UQU0 Gm2274-201ENSMUST00000184539 609 ntBASIC19.68■□□□□ 0.74
Brd9Q3UQU0 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Brd9Q3UQU0 Gm45058-201ENSMUST00000205810 766 ntBASIC19.68■□□□□ 0.74
Brd9Q3UQU0 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Brd9Q3UQU0 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Brd9Q3UQU0 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Brd9Q3UQU0 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Brd9Q3UQU0 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
Brd9Q3UQU0 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Brd9Q3UQU0 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Brd9Q3UQU0 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Brd9Q3UQU0 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Brd9Q3UQU0 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Brd9Q3UQU0 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Brd9Q3UQU0 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Brd9Q3UQU0 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Brd9Q3UQU0 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Brd9Q3UQU0 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Brd9Q3UQU0 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Brd9Q3UQU0 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Brd9Q3UQU0 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Brd9Q3UQU0 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Brd9Q3UQU0 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Brd9Q3UQU0 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Brd9Q3UQU0 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.67■□□□□ 0.74
Brd9Q3UQU0 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Brd9Q3UQU0 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Brd9Q3UQU0 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Brd9Q3UQU0 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Brd9Q3UQU0 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Brd9Q3UQU0 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Brd9Q3UQU0 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Brd9Q3UQU0 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Brd9Q3UQU0 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Brd9Q3UQU0 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Brd9Q3UQU0 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Brd9Q3UQU0 Gm37025-201ENSMUST00000195159 829 ntBASIC19.65■□□□□ 0.74
Brd9Q3UQU0 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Brd9Q3UQU0 Grk6-206ENSMUST00000224995 2971 ntBASIC19.65■□□□□ 0.74
Brd9Q3UQU0 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Brd9Q3UQU0 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Brd9Q3UQU0 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Brd9Q3UQU0 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Brd9Q3UQU0 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.65■□□□□ 0.74
Brd9Q3UQU0 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Brd9Q3UQU0 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Brd9Q3UQU0 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Brd9Q3UQU0 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Brd9Q3UQU0 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.64■□□□□ 0.74
Brd9Q3UQU0 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC19.64■□□□□ 0.73
Brd9Q3UQU0 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Brd9Q3UQU0 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Brd9Q3UQU0 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Brd9Q3UQU0 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Brd9Q3UQU0 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Brd9Q3UQU0 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Brd9Q3UQU0 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Brd9Q3UQU0 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Brd9Q3UQU0 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Brd9Q3UQU0 Gm43272-201ENSMUST00000200599 1584 ntBASIC19.63■□□□□ 0.73
Brd9Q3UQU0 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Brd9Q3UQU0 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Brd9Q3UQU0 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Brd9Q3UQU0 Mir5130-201ENSMUST00000175160 84 ntBASIC19.63■□□□□ 0.73
Brd9Q3UQU0 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Brd9Q3UQU0 Gm9731-201ENSMUST00000209480 747 ntBASIC19.63■□□□□ 0.73
Brd9Q3UQU0 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Brd9Q3UQU0 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Brd9Q3UQU0 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Brd9Q3UQU0 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Brd9Q3UQU0 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC19.62■□□□□ 0.73
Brd9Q3UQU0 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Brd9Q3UQU0 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Brd9Q3UQU0 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms