Protein–RNA interactions for Protein: Q3UN04

Usp30, Ubiquitin carboxyl-terminal hydrolase 30, mousemouse

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp30Q3UN04 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Usp30Q3UN04 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.66■□□□□ 0.42
Usp30Q3UN04 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp30Q3UN04 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp30Q3UN04 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp30Q3UN04 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Usp30Q3UN04 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp30Q3UN04 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp30Q3UN04 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp30Q3UN04 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Usp30Q3UN04 Gm16061-201ENSMUST00000122167 857 ntBASIC17.66■□□□□ 0.42
Usp30Q3UN04 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Usp30Q3UN04 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Usp30Q3UN04 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp30Q3UN04 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.66■□□□□ 0.42
Usp30Q3UN04 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Usp30Q3UN04 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Usp30Q3UN04 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp30Q3UN04 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Usp30Q3UN04 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Usp30Q3UN04 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp30Q3UN04 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp30Q3UN04 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp30Q3UN04 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Usp30Q3UN04 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Usp30Q3UN04 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Usp30Q3UN04 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp30Q3UN04 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.65■□□□□ 0.42
Usp30Q3UN04 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.65■□□□□ 0.42
Usp30Q3UN04 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Usp30Q3UN04 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.65■□□□□ 0.42
Usp30Q3UN04 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Usp30Q3UN04 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp30Q3UN04 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp30Q3UN04 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp30Q3UN04 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp30Q3UN04 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp30Q3UN04 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Usp30Q3UN04 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Usp30Q3UN04 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp30Q3UN04 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Usp30Q3UN04 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Usp30Q3UN04 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp30Q3UN04 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp30Q3UN04 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp30Q3UN04 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp30Q3UN04 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Usp30Q3UN04 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Usp30Q3UN04 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Usp30Q3UN04 Gm23634-201ENSMUST00000175071 91 ntBASIC17.64■□□□□ 0.41
Usp30Q3UN04 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.64■□□□□ 0.41
Usp30Q3UN04 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp30Q3UN04 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Usp30Q3UN04 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp30Q3UN04 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Usp30Q3UN04 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp30Q3UN04 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp30Q3UN04 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp30Q3UN04 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp30Q3UN04 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp30Q3UN04 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.64■□□□□ 0.41
Usp30Q3UN04 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp30Q3UN04 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp30Q3UN04 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp30Q3UN04 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp30Q3UN04 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Usp30Q3UN04 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Usp30Q3UN04 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Usp30Q3UN04 Gm13474-201ENSMUST00000122466 815 ntBASIC17.63■□□□□ 0.41
Usp30Q3UN04 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.63■□□□□ 0.41
Usp30Q3UN04 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC17.63■□□□□ 0.41
Usp30Q3UN04 Gm18101-201ENSMUST00000215769 548 ntBASIC17.63■□□□□ 0.41
Usp30Q3UN04 Gm7791-201ENSMUST00000219066 539 ntBASIC17.63■□□□□ 0.41
Usp30Q3UN04 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Usp30Q3UN04 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp30Q3UN04 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp30Q3UN04 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp30Q3UN04 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp30Q3UN04 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp30Q3UN04 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp30Q3UN04 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp30Q3UN04 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp30Q3UN04 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp30Q3UN04 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Usp30Q3UN04 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
Usp30Q3UN04 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp30Q3UN04 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Usp30Q3UN04 Gm37025-201ENSMUST00000195159 829 ntBASIC17.62■□□□□ 0.41
Usp30Q3UN04 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp30Q3UN04 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp30Q3UN04 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Usp30Q3UN04 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp30Q3UN04 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Usp30Q3UN04 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp30Q3UN04 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp30Q3UN04 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp30Q3UN04 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Usp30Q3UN04 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp30Q3UN04 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp30Q3UN04 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms