Protein–RNA interactions for Protein: Q3U0P1

Palb2, Partner and localizer of BRCA2, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Palb2Q3U0P1 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Palb2Q3U0P1 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Palb2Q3U0P1 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Palb2Q3U0P1 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.62■□□□□ 0.73
Palb2Q3U0P1 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Palb2Q3U0P1 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Palb2Q3U0P1 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Palb2Q3U0P1 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Palb2Q3U0P1 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Palb2Q3U0P1 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC19.62■□□□□ 0.73
Palb2Q3U0P1 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Palb2Q3U0P1 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC19.62■□□□□ 0.73
Palb2Q3U0P1 AC130713.1-201ENSMUST00000228853 1096 ntBASIC19.62■□□□□ 0.73
Palb2Q3U0P1 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Palb2Q3U0P1 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Palb2Q3U0P1 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Palb2Q3U0P1 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Palb2Q3U0P1 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Palb2Q3U0P1 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.61■□□□□ 0.73
Palb2Q3U0P1 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Palb2Q3U0P1 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Palb2Q3U0P1 Gm17661-201ENSMUST00000170317 270 ntBASIC19.61■□□□□ 0.73
Palb2Q3U0P1 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.61■□□□□ 0.73
Palb2Q3U0P1 Gm38027-201ENSMUST00000192315 235 ntBASIC19.61■□□□□ 0.73
Palb2Q3U0P1 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Palb2Q3U0P1 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Palb2Q3U0P1 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Palb2Q3U0P1 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Palb2Q3U0P1 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Palb2Q3U0P1 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Palb2Q3U0P1 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Palb2Q3U0P1 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Palb2Q3U0P1 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Palb2Q3U0P1 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Palb2Q3U0P1 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Palb2Q3U0P1 Gm44544-201ENSMUST00000207052 1844 ntBASIC19.6■□□□□ 0.73
Palb2Q3U0P1 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Palb2Q3U0P1 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC19.6■□□□□ 0.73
Palb2Q3U0P1 AC154471.1-201ENSMUST00000224418 436 ntBASIC19.6■□□□□ 0.73
Palb2Q3U0P1 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Palb2Q3U0P1 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Palb2Q3U0P1 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Palb2Q3U0P1 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.6■□□□□ 0.73
Palb2Q3U0P1 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.59■□□□□ 0.73
Palb2Q3U0P1 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.59■□□□□ 0.73
Palb2Q3U0P1 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC19.59■□□□□ 0.73
Palb2Q3U0P1 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Palb2Q3U0P1 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Palb2Q3U0P1 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Palb2Q3U0P1 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Palb2Q3U0P1 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Palb2Q3U0P1 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC19.59■□□□□ 0.73
Palb2Q3U0P1 Gm17971-201ENSMUST00000190239 806 ntBASIC19.59■□□□□ 0.73
Palb2Q3U0P1 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
Palb2Q3U0P1 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Palb2Q3U0P1 Gm7461-201ENSMUST00000058918 827 ntBASIC19.59■□□□□ 0.73
Palb2Q3U0P1 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.59■□□□□ 0.73
Palb2Q3U0P1 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.59■□□□□ 0.73
Palb2Q3U0P1 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Palb2Q3U0P1 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Palb2Q3U0P1 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Palb2Q3U0P1 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Palb2Q3U0P1 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Palb2Q3U0P1 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Palb2Q3U0P1 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Palb2Q3U0P1 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Palb2Q3U0P1 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Palb2Q3U0P1 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Palb2Q3U0P1 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Palb2Q3U0P1 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC19.58■□□□□ 0.72
Palb2Q3U0P1 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Palb2Q3U0P1 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC19.58■□□□□ 0.72
Palb2Q3U0P1 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Palb2Q3U0P1 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Palb2Q3U0P1 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.58■□□□□ 0.72
Palb2Q3U0P1 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Palb2Q3U0P1 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Palb2Q3U0P1 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Palb2Q3U0P1 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.57■□□□□ 0.72
Palb2Q3U0P1 Gm9694-201ENSMUST00000193347 1189 ntBASIC19.57■□□□□ 0.72
Palb2Q3U0P1 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Palb2Q3U0P1 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Palb2Q3U0P1 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Palb2Q3U0P1 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Palb2Q3U0P1 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Palb2Q3U0P1 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Palb2Q3U0P1 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Palb2Q3U0P1 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.56■□□□□ 0.72
Palb2Q3U0P1 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Palb2Q3U0P1 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Palb2Q3U0P1 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Palb2Q3U0P1 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Palb2Q3U0P1 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Palb2Q3U0P1 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC19.56■□□□□ 0.72
Palb2Q3U0P1 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Palb2Q3U0P1 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Palb2Q3U0P1 Gm8258-201ENSMUST00000055593 1449 ntBASIC19.56■□□□□ 0.72
Palb2Q3U0P1 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Palb2Q3U0P1 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Palb2Q3U0P1 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms