Protein–RNA interactions for Protein: Q3TJD7

Pdlim7, PDZ and LIM domain protein 7, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim7Q3TJD7 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Pdlim7Q3TJD7 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Pdlim7Q3TJD7 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Pdlim7Q3TJD7 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Pdlim7Q3TJD7 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pdlim7Q3TJD7 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Pdlim7Q3TJD7 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Pdlim7Q3TJD7 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pdlim7Q3TJD7 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC19.8■□□□□ 0.76
Pdlim7Q3TJD7 Gm18115-201ENSMUST00000221209 621 ntBASIC19.8■□□□□ 0.76
Pdlim7Q3TJD7 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Pdlim7Q3TJD7 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Pdlim7Q3TJD7 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pdlim7Q3TJD7 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pdlim7Q3TJD7 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pdlim7Q3TJD7 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pdlim7Q3TJD7 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pdlim7Q3TJD7 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Pdlim7Q3TJD7 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pdlim7Q3TJD7 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.79■□□□□ 0.76
Pdlim7Q3TJD7 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Pdlim7Q3TJD7 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pdlim7Q3TJD7 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pdlim7Q3TJD7 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pdlim7Q3TJD7 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pdlim7Q3TJD7 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pdlim7Q3TJD7 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Pdlim7Q3TJD7 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Pdlim7Q3TJD7 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC19.78■□□□□ 0.76
Pdlim7Q3TJD7 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Pdlim7Q3TJD7 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pdlim7Q3TJD7 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC19.78■□□□□ 0.76
Pdlim7Q3TJD7 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.78■□□□□ 0.76
Pdlim7Q3TJD7 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
Pdlim7Q3TJD7 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Pdlim7Q3TJD7 Spr-ps1-201ENSMUST00000089584 605 ntBASIC19.78■□□□□ 0.76
Pdlim7Q3TJD7 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Pdlim7Q3TJD7 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pdlim7Q3TJD7 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pdlim7Q3TJD7 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pdlim7Q3TJD7 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Pdlim7Q3TJD7 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pdlim7Q3TJD7 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Pdlim7Q3TJD7 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC19.77■□□□□ 0.76
Pdlim7Q3TJD7 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Pdlim7Q3TJD7 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Pdlim7Q3TJD7 Gm9731-201ENSMUST00000209480 747 ntBASIC19.77■□□□□ 0.76
Pdlim7Q3TJD7 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pdlim7Q3TJD7 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pdlim7Q3TJD7 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Pdlim7Q3TJD7 Tgds-204ENSMUST00000228543 1594 ntBASIC19.77■□□□□ 0.76
Pdlim7Q3TJD7 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pdlim7Q3TJD7 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
Pdlim7Q3TJD7 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pdlim7Q3TJD7 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pdlim7Q3TJD7 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Pdlim7Q3TJD7 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pdlim7Q3TJD7 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pdlim7Q3TJD7 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC19.76■□□□□ 0.75
Pdlim7Q3TJD7 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pdlim7Q3TJD7 Gm27742-201ENSMUST00000184667 60 ntBASIC19.76■□□□□ 0.75
Pdlim7Q3TJD7 Il3ra-202ENSMUST00000223589 738 ntBASIC19.76■□□□□ 0.75
Pdlim7Q3TJD7 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pdlim7Q3TJD7 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pdlim7Q3TJD7 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pdlim7Q3TJD7 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pdlim7Q3TJD7 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pdlim7Q3TJD7 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pdlim7Q3TJD7 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pdlim7Q3TJD7 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pdlim7Q3TJD7 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Pdlim7Q3TJD7 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Pdlim7Q3TJD7 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pdlim7Q3TJD7 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Pdlim7Q3TJD7 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pdlim7Q3TJD7 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pdlim7Q3TJD7 Gm3272-201ENSMUST00000181181 1229 ntBASIC19.75■□□□□ 0.75
Pdlim7Q3TJD7 Gm5867-201ENSMUST00000063197 592 ntBASIC19.75■□□□□ 0.75
Pdlim7Q3TJD7 Gm10566-201ENSMUST00000086739 996 ntBASIC19.75■□□□□ 0.75
Pdlim7Q3TJD7 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pdlim7Q3TJD7 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pdlim7Q3TJD7 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC19.74■□□□□ 0.75
Pdlim7Q3TJD7 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pdlim7Q3TJD7 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC19.74■□□□□ 0.75
Pdlim7Q3TJD7 Gm25925-201ENSMUST00000158314 306 ntBASIC19.74■□□□□ 0.75
Pdlim7Q3TJD7 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Pdlim7Q3TJD7 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC19.74■□□□□ 0.75
Pdlim7Q3TJD7 Gm43514-201ENSMUST00000198852 424 ntBASIC19.74■□□□□ 0.75
Pdlim7Q3TJD7 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC19.74■□□□□ 0.75
Pdlim7Q3TJD7 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Pdlim7Q3TJD7 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Pdlim7Q3TJD7 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pdlim7Q3TJD7 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pdlim7Q3TJD7 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Pdlim7Q3TJD7 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pdlim7Q3TJD7 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pdlim7Q3TJD7 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pdlim7Q3TJD7 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Pdlim7Q3TJD7 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pdlim7Q3TJD7 Gm26039-201ENSMUST00000158152 144 ntBASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms