Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Q3KNL4 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Q3KNL4 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Q3KNL4 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Q3KNL4 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Q3KNL4 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Q3KNL4 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Q3KNL4 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Q3KNL4 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Q3KNL4 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Q3KNL4 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Q3KNL4 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.29■□□□□ 0.36
Q3KNL4 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
Q3KNL4 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Q3KNL4 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Q3KNL4 Gm18284-201ENSMUST00000172604 624 ntBASIC17.29■□□□□ 0.36
Q3KNL4 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Q3KNL4 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Q3KNL4 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Q3KNL4 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Q3KNL4 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Q3KNL4 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.29■□□□□ 0.36
Q3KNL4 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Q3KNL4 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Q3KNL4 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
Q3KNL4 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Q3KNL4 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Q3KNL4 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Q3KNL4 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Q3KNL4 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Q3KNL4 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Q3KNL4 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Q3KNL4 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Q3KNL4 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.28■□□□□ 0.36
Q3KNL4 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Q3KNL4 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.28■□□□□ 0.36
Q3KNL4 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Q3KNL4 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.28■□□□□ 0.36
Q3KNL4 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Q3KNL4 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Q3KNL4 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Q3KNL4 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Q3KNL4 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.27■□□□□ 0.36
Q3KNL4 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Q3KNL4 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Q3KNL4 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Q3KNL4 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Q3KNL4 Gm7291-201ENSMUST00000199147 382 ntBASIC17.27■□□□□ 0.36
Q3KNL4 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Q3KNL4 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Q3KNL4 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Q3KNL4 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Q3KNL4 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Q3KNL4 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.27■□□□□ 0.35
Q3KNL4 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.27■□□□□ 0.35
Q3KNL4 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Q3KNL4 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Q3KNL4 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Q3KNL4 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Q3KNL4 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Q3KNL4 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Q3KNL4 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Q3KNL4 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Q3KNL4 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Q3KNL4 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Q3KNL4 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Q3KNL4 Gm7290-201ENSMUST00000104990 617 ntBASIC17.26■□□□□ 0.35
Q3KNL4 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Q3KNL4 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Q3KNL4 Gm12918-201ENSMUST00000120234 636 ntBASIC17.26■□□□□ 0.35
Q3KNL4 Gm15710-201ENSMUST00000121821 636 ntBASIC17.26■□□□□ 0.35
Q3KNL4 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Q3KNL4 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Q3KNL4 Gm26571-201ENSMUST00000181399 666 ntBASIC17.26■□□□□ 0.35
Q3KNL4 Gm5075-201ENSMUST00000196916 622 ntBASIC17.26■□□□□ 0.35
Q3KNL4 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.26■□□□□ 0.35
Q3KNL4 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Q3KNL4 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Q3KNL4 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Q3KNL4 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Q3KNL4 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.26■□□□□ 0.35
Q3KNL4 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.26■□□□□ 0.35
Q3KNL4 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Q3KNL4 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Q3KNL4 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Q3KNL4 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Q3KNL4 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Q3KNL4 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Q3KNL4 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.26■□□□□ 0.35
Q3KNL4 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Q3KNL4 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Q3KNL4 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Q3KNL4 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Q3KNL4 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.25■□□□□ 0.35
Q3KNL4 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Q3KNL4 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Q3KNL4 Idnk-204ENSMUST00000226010 1898 ntBASIC17.25■□□□□ 0.35
Q3KNL4 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Q3KNL4 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
Q3KNL4 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms