Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hspg2Q05793 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hspg2Q05793 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Hspg2Q05793 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hspg2Q05793 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC13.01□□□□□ -0.33
Hspg2Q05793 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hspg2Q05793 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Hspg2Q05793 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hspg2Q05793 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hspg2Q05793 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hspg2Q05793 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hspg2Q05793 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Hspg2Q05793 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
Hspg2Q05793 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hspg2Q05793 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Hspg2Q05793 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Hspg2Q05793 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hspg2Q05793 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Hspg2Q05793 Gm6190-201ENSMUST00000220683 1374 ntBASIC13.01□□□□□ -0.33
Hspg2Q05793 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Hspg2Q05793 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hspg2Q05793 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Hspg2Q05793 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Hspg2Q05793 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Hspg2Q05793 Gm35558-201ENSMUST00000222675 2219 ntBASIC13□□□□□ -0.33
Hspg2Q05793 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hspg2Q05793 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC13□□□□□ -0.33
Hspg2Q05793 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hspg2Q05793 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC13□□□□□ -0.33
Hspg2Q05793 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC13□□□□□ -0.33
Hspg2Q05793 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC13□□□□□ -0.33
Hspg2Q05793 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Hspg2Q05793 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hspg2Q05793 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC13□□□□□ -0.33
Hspg2Q05793 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC13□□□□□ -0.33
Hspg2Q05793 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC13□□□□□ -0.33
Hspg2Q05793 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC13□□□□□ -0.33
Hspg2Q05793 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hspg2Q05793 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Hspg2Q05793 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC13□□□□□ -0.33
Hspg2Q05793 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Hspg2Q05793 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hspg2Q05793 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hspg2Q05793 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC12.99□□□□□ -0.33
Hspg2Q05793 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hspg2Q05793 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hspg2Q05793 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hspg2Q05793 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hspg2Q05793 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC12.99□□□□□ -0.33
Hspg2Q05793 Il3ra-202ENSMUST00000223589 738 ntBASIC12.99□□□□□ -0.33
Hspg2Q05793 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC12.99□□□□□ -0.33
Hspg2Q05793 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hspg2Q05793 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hspg2Q05793 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hspg2Q05793 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hspg2Q05793 Gm18206-201ENSMUST00000207027 926 ntBASIC12.99□□□□□ -0.33
Hspg2Q05793 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hspg2Q05793 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hspg2Q05793 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hspg2Q05793 Gm13884-201ENSMUST00000118103 829 ntBASIC12.99□□□□□ -0.33
Hspg2Q05793 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hspg2Q05793 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hspg2Q05793 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Hspg2Q05793 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hspg2Q05793 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Hspg2Q05793 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hspg2Q05793 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hspg2Q05793 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hspg2Q05793 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hspg2Q05793 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC12.98□□□□□ -0.33
Hspg2Q05793 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hspg2Q05793 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Hspg2Q05793 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Hspg2Q05793 AC120002.2-201ENSMUST00000220205 773 ntBASIC12.98□□□□□ -0.33
Hspg2Q05793 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Hspg2Q05793 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Hspg2Q05793 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hspg2Q05793 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Hspg2Q05793 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hspg2Q05793 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hspg2Q05793 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC12.98□□□□□ -0.33
Hspg2Q05793 Zkscan4-202ENSMUST00000225845 1506 ntBASIC12.98□□□□□ -0.33
Hspg2Q05793 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Hspg2Q05793 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC12.98□□□□□ -0.33
Hspg2Q05793 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Hspg2Q05793 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Hspg2Q05793 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hspg2Q05793 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hspg2Q05793 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hspg2Q05793 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Hspg2Q05793 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hspg2Q05793 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hspg2Q05793 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hspg2Q05793 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Hspg2Q05793 Actl10-202ENSMUST00000226583 1501 ntBASIC12.97□□□□□ -0.33
Hspg2Q05793 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hspg2Q05793 Mir1668-201ENSMUST00000184114 107 ntBASIC12.97□□□□□ -0.33
Hspg2Q05793 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hspg2Q05793 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hspg2Q05793 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms