Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PrkdcP97313 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
PrkdcP97313 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
PrkdcP97313 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
PrkdcP97313 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PrkdcP97313 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
PrkdcP97313 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PrkdcP97313 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
PrkdcP97313 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PrkdcP97313 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PrkdcP97313 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PrkdcP97313 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PrkdcP97313 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
PrkdcP97313 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PrkdcP97313 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
PrkdcP97313 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
PrkdcP97313 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
PrkdcP97313 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PrkdcP97313 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PrkdcP97313 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PrkdcP97313 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
PrkdcP97313 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PrkdcP97313 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
PrkdcP97313 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
PrkdcP97313 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
PrkdcP97313 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
PrkdcP97313 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
PrkdcP97313 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
PrkdcP97313 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
PrkdcP97313 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PrkdcP97313 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PrkdcP97313 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
PrkdcP97313 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
PrkdcP97313 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
PrkdcP97313 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PrkdcP97313 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC12.11□□□□□ -0.47
PrkdcP97313 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PrkdcP97313 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
PrkdcP97313 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PrkdcP97313 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PrkdcP97313 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC12.11□□□□□ -0.47
PrkdcP97313 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PrkdcP97313 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
PrkdcP97313 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
PrkdcP97313 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC12.11□□□□□ -0.47
PrkdcP97313 Gm14494-201ENSMUST00000118786 435 ntBASIC12.11□□□□□ -0.47
PrkdcP97313 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
PrkdcP97313 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PrkdcP97313 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PrkdcP97313 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
PrkdcP97313 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
PrkdcP97313 Gm9727-201ENSMUST00000161387 555 ntBASIC12.1□□□□□ -0.47
PrkdcP97313 Gm1818-201ENSMUST00000169406 1184 ntBASIC12.1□□□□□ -0.47
PrkdcP97313 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC12.1□□□□□ -0.47
PrkdcP97313 AC159114.1-201ENSMUST00000220349 266 ntBASIC12.1□□□□□ -0.47
PrkdcP97313 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
PrkdcP97313 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
PrkdcP97313 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
PrkdcP97313 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
PrkdcP97313 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
PrkdcP97313 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
PrkdcP97313 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
PrkdcP97313 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
PrkdcP97313 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
PrkdcP97313 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
PrkdcP97313 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
PrkdcP97313 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
PrkdcP97313 AC158982.1-201ENSMUST00000228377 901 ntBASIC12.1□□□□□ -0.47
PrkdcP97313 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
PrkdcP97313 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
PrkdcP97313 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
PrkdcP97313 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
PrkdcP97313 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
PrkdcP97313 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
PrkdcP97313 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
PrkdcP97313 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
PrkdcP97313 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
PrkdcP97313 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
PrkdcP97313 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
PrkdcP97313 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
PrkdcP97313 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
PrkdcP97313 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
PrkdcP97313 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
PrkdcP97313 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
PrkdcP97313 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
PrkdcP97313 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
PrkdcP97313 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
PrkdcP97313 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
PrkdcP97313 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
PrkdcP97313 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
PrkdcP97313 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
PrkdcP97313 AC225888.1-201ENSMUST00000227184 728 ntBASIC12.09□□□□□ -0.47
PrkdcP97313 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
PrkdcP97313 Gm13127-201ENSMUST00000118978 1389 ntBASIC12.09□□□□□ -0.47
PrkdcP97313 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
PrkdcP97313 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
PrkdcP97313 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
PrkdcP97313 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC12.09□□□□□ -0.47
PrkdcP97313 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
PrkdcP97313 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms