Protein–RNA interactions for Protein: P62984

Uba52, Ubiquitin-60S ribosomal protein L40, mousemouse

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba52P62984 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Uba52P62984 Gm8520-201ENSMUST00000186517 868 ntBASIC15.28■□□□□ 0.04
Uba52P62984 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Uba52P62984 Gm6365-201ENSMUST00000054711 744 ntBASIC15.28■□□□□ 0.04
Uba52P62984 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Uba52P62984 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC15.28■□□□□ 0.04
Uba52P62984 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Uba52P62984 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Uba52P62984 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Uba52P62984 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Uba52P62984 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Uba52P62984 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.27■□□□□ 0.04
Uba52P62984 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Uba52P62984 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC15.27■□□□□ 0.04
Uba52P62984 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Uba52P62984 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Uba52P62984 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Uba52P62984 Gm12527-201ENSMUST00000117967 564 ntBASIC15.27■□□□□ 0.04
Uba52P62984 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC15.27■□□□□ 0.04
Uba52P62984 Gm38205-201ENSMUST00000192243 258 ntBASIC15.27■□□□□ 0.04
Uba52P62984 CT010467.1-202ENSMUST00000205406 714 ntBASIC15.27■□□□□ 0.04
Uba52P62984 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Uba52P62984 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC15.27■□□□□ 0.04
Uba52P62984 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Uba52P62984 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Uba52P62984 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Uba52P62984 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Uba52P62984 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Uba52P62984 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Uba52P62984 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Uba52P62984 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Uba52P62984 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Uba52P62984 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
Uba52P62984 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Uba52P62984 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Uba52P62984 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Uba52P62984 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Uba52P62984 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Uba52P62984 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Uba52P62984 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Uba52P62984 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Uba52P62984 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Uba52P62984 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
Uba52P62984 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Uba52P62984 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC15.26■□□□□ 0.03
Uba52P62984 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Uba52P62984 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC15.26■□□□□ 0.03
Uba52P62984 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Uba52P62984 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Uba52P62984 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC15.26■□□□□ 0.03
Uba52P62984 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Uba52P62984 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Uba52P62984 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Uba52P62984 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Uba52P62984 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Uba52P62984 Gm28265-201ENSMUST00000188201 2319 ntBASIC15.26■□□□□ 0.03
Uba52P62984 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Uba52P62984 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Uba52P62984 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Uba52P62984 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Uba52P62984 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Uba52P62984 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Uba52P62984 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Uba52P62984 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Uba52P62984 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Uba52P62984 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC15.25■□□□□ 0.03
Uba52P62984 Gm6420-201ENSMUST00000193885 723 ntBASIC15.25■□□□□ 0.03
Uba52P62984 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Uba52P62984 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Uba52P62984 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Uba52P62984 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Uba52P62984 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Uba52P62984 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Uba52P62984 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Uba52P62984 Gm42911-201ENSMUST00000199360 1630 ntBASIC15.25■□□□□ 0.03
Uba52P62984 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Uba52P62984 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC15.24■□□□□ 0.03
Uba52P62984 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Uba52P62984 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Uba52P62984 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Uba52P62984 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC15.24■□□□□ 0.03
Uba52P62984 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Uba52P62984 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Uba52P62984 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Uba52P62984 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Uba52P62984 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Uba52P62984 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Uba52P62984 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Uba52P62984 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Uba52P62984 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Uba52P62984 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Uba52P62984 Gm43859-201ENSMUST00000200075 1412 ntBASIC15.24■□□□□ 0.03
Uba52P62984 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Uba52P62984 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Uba52P62984 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Uba52P62984 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Uba52P62984 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Uba52P62984 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Uba52P62984 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Uba52P62984 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms