Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC14.24□□□□□ -0.13
Lmo4P61969 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lmo4P61969 AA414768-201ENSMUST00000121924 1257 ntBASIC14.24□□□□□ -0.13
Lmo4P61969 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Lmo4P61969 Gm7370-201ENSMUST00000219471 767 ntBASIC14.24□□□□□ -0.13
Lmo4P61969 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Lmo4P61969 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lmo4P61969 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lmo4P61969 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lmo4P61969 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lmo4P61969 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Lmo4P61969 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lmo4P61969 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lmo4P61969 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Lmo4P61969 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lmo4P61969 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Lmo4P61969 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Lmo4P61969 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lmo4P61969 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lmo4P61969 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lmo4P61969 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Lmo4P61969 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lmo4P61969 Dapk1-207ENSMUST00000226059 5009 ntBASIC14.23□□□□□ -0.13
Lmo4P61969 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Lmo4P61969 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Lmo4P61969 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC14.23□□□□□ -0.13
Lmo4P61969 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Lmo4P61969 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC14.23□□□□□ -0.13
Lmo4P61969 AC120002.2-201ENSMUST00000220205 773 ntBASIC14.23□□□□□ -0.13
Lmo4P61969 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Lmo4P61969 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lmo4P61969 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lmo4P61969 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lmo4P61969 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lmo4P61969 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lmo4P61969 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lmo4P61969 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Lmo4P61969 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lmo4P61969 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lmo4P61969 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Lmo4P61969 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lmo4P61969 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lmo4P61969 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lmo4P61969 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Lmo4P61969 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lmo4P61969 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Lmo4P61969 Gm6345-202ENSMUST00000180900 204 ntBASIC14.22□□□□□ -0.13
Lmo4P61969 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC14.22□□□□□ -0.13
Lmo4P61969 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC14.22□□□□□ -0.13
Lmo4P61969 Gm45141-201ENSMUST00000206502 1888 ntBASIC14.22□□□□□ -0.13
Lmo4P61969 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lmo4P61969 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lmo4P61969 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC14.22□□□□□ -0.13
Lmo4P61969 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
Lmo4P61969 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lmo4P61969 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Lmo4P61969 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lmo4P61969 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Lmo4P61969 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Lmo4P61969 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Lmo4P61969 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lmo4P61969 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Lmo4P61969 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lmo4P61969 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Lmo4P61969 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Lmo4P61969 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC14.21□□□□□ -0.13
Lmo4P61969 Gm7367-201ENSMUST00000057611 492 ntBASIC14.21□□□□□ -0.13
Lmo4P61969 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lmo4P61969 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lmo4P61969 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lmo4P61969 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Lmo4P61969 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Lmo4P61969 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Lmo4P61969 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC14.21□□□□□ -0.14
Lmo4P61969 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Lmo4P61969 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Lmo4P61969 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC14.21□□□□□ -0.14
Lmo4P61969 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Lmo4P61969 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Lmo4P61969 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lmo4P61969 Spsb2-203ENSMUST00000112473 1322 ntBASIC14.2□□□□□ -0.14
Lmo4P61969 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lmo4P61969 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Lmo4P61969 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lmo4P61969 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lmo4P61969 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Lmo4P61969 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lmo4P61969 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lmo4P61969 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lmo4P61969 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Lmo4P61969 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Lmo4P61969 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Lmo4P61969 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lmo4P61969 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lmo4P61969 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lmo4P61969 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Lmo4P61969 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Lmo4P61969 Dmtn-210ENSMUST00000228824 2377 ntBASIC14.19□□□□□ -0.14
Lmo4P61969 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lmo4P61969 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms