Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ddx6P54823 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ddx6P54823 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ddx6P54823 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ddx6P54823 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ddx6P54823 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ddx6P54823 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Ddx6P54823 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
Ddx6P54823 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC17.88■□□□□ 0.45
Ddx6P54823 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.88■□□□□ 0.45
Ddx6P54823 Gm17661-201ENSMUST00000170317 270 ntBASIC17.88■□□□□ 0.45
Ddx6P54823 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ddx6P54823 Gm6345-202ENSMUST00000180900 204 ntBASIC17.88■□□□□ 0.45
Ddx6P54823 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ddx6P54823 Gm7367-201ENSMUST00000057611 492 ntBASIC17.88■□□□□ 0.45
Ddx6P54823 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ddx6P54823 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ddx6P54823 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ddx6P54823 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ddx6P54823 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ddx6P54823 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ddx6P54823 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ddx6P54823 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ddx6P54823 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ddx6P54823 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ddx6P54823 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ddx6P54823 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Ddx6P54823 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ddx6P54823 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.87■□□□□ 0.45
Ddx6P54823 Mir1668-201ENSMUST00000184114 107 ntBASIC17.87■□□□□ 0.45
Ddx6P54823 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Ddx6P54823 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.87■□□□□ 0.45
Ddx6P54823 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.87■□□□□ 0.45
Ddx6P54823 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ddx6P54823 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ddx6P54823 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ddx6P54823 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Ddx6P54823 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ddx6P54823 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ddx6P54823 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ddx6P54823 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ddx6P54823 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ddx6P54823 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ddx6P54823 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Ddx6P54823 Gm25016-201ENSMUST00000158399 131 ntBASIC17.86■□□□□ 0.45
Ddx6P54823 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ddx6P54823 Gm27389-201ENSMUST00000183622 195 ntBASIC17.86■□□□□ 0.45
Ddx6P54823 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC17.86■□□□□ 0.45
Ddx6P54823 Gm7370-201ENSMUST00000219471 767 ntBASIC17.86■□□□□ 0.45
Ddx6P54823 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Ddx6P54823 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ddx6P54823 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Ddx6P54823 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ddx6P54823 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ddx6P54823 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Ddx6P54823 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ddx6P54823 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ddx6P54823 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.86■□□□□ 0.45
Ddx6P54823 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ddx6P54823 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ddx6P54823 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ddx6P54823 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ddx6P54823 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Ddx6P54823 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ddx6P54823 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ddx6P54823 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ddx6P54823 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Ddx6P54823 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Ddx6P54823 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ddx6P54823 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ddx6P54823 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.85■□□□□ 0.45
Ddx6P54823 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ddx6P54823 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.85■□□□□ 0.45
Ddx6P54823 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ddx6P54823 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.85■□□□□ 0.45
Ddx6P54823 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ddx6P54823 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ddx6P54823 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ddx6P54823 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ddx6P54823 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ddx6P54823 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ddx6P54823 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ddx6P54823 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ddx6P54823 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ddx6P54823 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ddx6P54823 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ddx6P54823 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.84■□□□□ 0.45
Ddx6P54823 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Ddx6P54823 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ddx6P54823 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ddx6P54823 Iqck-206ENSMUST00000208658 2891 ntBASIC17.84■□□□□ 0.45
Ddx6P54823 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ddx6P54823 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ddx6P54823 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.84■□□□□ 0.45
Ddx6P54823 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ddx6P54823 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ddx6P54823 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Ddx6P54823 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ddx6P54823 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.84■□□□□ 0.45
Ddx6P54823 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms