Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pdx1P52946 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pdx1P52946 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pdx1P52946 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pdx1P52946 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.4■□□□□ 0.38
Pdx1P52946 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Pdx1P52946 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pdx1P52946 Gm6576-201ENSMUST00000169678 883 ntBASIC17.4■□□□□ 0.38
Pdx1P52946 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pdx1P52946 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pdx1P52946 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Pdx1P52946 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pdx1P52946 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.4■□□□□ 0.38
Pdx1P52946 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
Pdx1P52946 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Pdx1P52946 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pdx1P52946 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pdx1P52946 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.39■□□□□ 0.37
Pdx1P52946 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.39■□□□□ 0.37
Pdx1P52946 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.39■□□□□ 0.37
Pdx1P52946 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Pdx1P52946 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.39■□□□□ 0.37
Pdx1P52946 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.39■□□□□ 0.37
Pdx1P52946 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pdx1P52946 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pdx1P52946 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pdx1P52946 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pdx1P52946 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pdx1P52946 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pdx1P52946 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Pdx1P52946 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pdx1P52946 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pdx1P52946 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Pdx1P52946 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pdx1P52946 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pdx1P52946 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Pdx1P52946 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Pdx1P52946 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pdx1P52946 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pdx1P52946 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
Pdx1P52946 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pdx1P52946 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pdx1P52946 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pdx1P52946 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pdx1P52946 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pdx1P52946 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pdx1P52946 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Pdx1P52946 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pdx1P52946 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pdx1P52946 Gm12382-201ENSMUST00000122005 922 ntBASIC17.37■□□□□ 0.37
Pdx1P52946 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pdx1P52946 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pdx1P52946 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pdx1P52946 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Pdx1P52946 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.37■□□□□ 0.37
Pdx1P52946 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pdx1P52946 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pdx1P52946 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pdx1P52946 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Pdx1P52946 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.37■□□□□ 0.37
Pdx1P52946 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.37■□□□□ 0.37
Pdx1P52946 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Pdx1P52946 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pdx1P52946 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Pdx1P52946 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Pdx1P52946 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pdx1P52946 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pdx1P52946 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pdx1P52946 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pdx1P52946 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.36■□□□□ 0.37
Pdx1P52946 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pdx1P52946 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.36■□□□□ 0.37
Pdx1P52946 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
Pdx1P52946 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Pdx1P52946 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pdx1P52946 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pdx1P52946 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.36■□□□□ 0.37
Pdx1P52946 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Pdx1P52946 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pdx1P52946 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.36■□□□□ 0.37
Pdx1P52946 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pdx1P52946 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.36■□□□□ 0.37
Pdx1P52946 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pdx1P52946 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pdx1P52946 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pdx1P52946 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pdx1P52946 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pdx1P52946 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pdx1P52946 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pdx1P52946 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pdx1P52946 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.36■□□□□ 0.37
Pdx1P52946 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pdx1P52946 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pdx1P52946 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Pdx1P52946 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pdx1P52946 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pdx1P52946 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pdx1P52946 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pdx1P52946 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pdx1P52946 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 72.3 ms