Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SftpbP50405 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SftpbP50405 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SftpbP50405 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
SftpbP50405 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
SftpbP50405 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
SftpbP50405 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.01■□□□□ 0.47
SftpbP50405 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SftpbP50405 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SftpbP50405 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SftpbP50405 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SftpbP50405 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.01■□□□□ 0.47
SftpbP50405 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
SftpbP50405 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SftpbP50405 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SftpbP50405 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
SftpbP50405 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
SftpbP50405 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
SftpbP50405 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
SftpbP50405 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
SftpbP50405 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18■□□□□ 0.47
SftpbP50405 Gm26571-201ENSMUST00000181399 666 ntBASIC18■□□□□ 0.47
SftpbP50405 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18■□□□□ 0.47
SftpbP50405 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18■□□□□ 0.47
SftpbP50405 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
SftpbP50405 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SftpbP50405 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
SftpbP50405 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
SftpbP50405 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
SftpbP50405 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SftpbP50405 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SftpbP50405 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
SftpbP50405 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SftpbP50405 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SftpbP50405 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SftpbP50405 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
SftpbP50405 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.99■□□□□ 0.47
SftpbP50405 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SftpbP50405 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
SftpbP50405 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
SftpbP50405 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SftpbP50405 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
SftpbP50405 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SftpbP50405 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.99■□□□□ 0.47
SftpbP50405 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SftpbP50405 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SftpbP50405 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SftpbP50405 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
SftpbP50405 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SftpbP50405 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.99■□□□□ 0.47
SftpbP50405 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SftpbP50405 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
SftpbP50405 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
SftpbP50405 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SftpbP50405 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SftpbP50405 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SftpbP50405 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.98■□□□□ 0.47
SftpbP50405 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SftpbP50405 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
SftpbP50405 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SftpbP50405 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SftpbP50405 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
SftpbP50405 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SftpbP50405 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SftpbP50405 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.98■□□□□ 0.47
SftpbP50405 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SftpbP50405 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SftpbP50405 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SftpbP50405 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SftpbP50405 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SftpbP50405 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.98■□□□□ 0.47
SftpbP50405 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
SftpbP50405 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SftpbP50405 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SftpbP50405 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
SftpbP50405 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SftpbP50405 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
SftpbP50405 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
SftpbP50405 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SftpbP50405 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
SftpbP50405 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
SftpbP50405 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SftpbP50405 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SftpbP50405 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SftpbP50405 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SftpbP50405 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SftpbP50405 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SftpbP50405 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SftpbP50405 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SftpbP50405 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SftpbP50405 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.96■□□□□ 0.47
SftpbP50405 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SftpbP50405 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
SftpbP50405 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SftpbP50405 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SftpbP50405 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
SftpbP50405 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SftpbP50405 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
SftpbP50405 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SftpbP50405 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms