Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
LtbrP50284 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
LtbrP50284 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
LtbrP50284 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC20.65■□□□□ 0.9
LtbrP50284 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
LtbrP50284 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LtbrP50284 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LtbrP50284 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
LtbrP50284 Gm6443-201ENSMUST00000203599 874 ntBASIC20.65■□□□□ 0.9
LtbrP50284 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC20.65■□□□□ 0.9
LtbrP50284 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC20.65■□□□□ 0.9
LtbrP50284 Grk6-206ENSMUST00000224995 2971 ntBASIC20.65■□□□□ 0.9
LtbrP50284 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
LtbrP50284 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LtbrP50284 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LtbrP50284 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
LtbrP50284 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
LtbrP50284 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
LtbrP50284 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
LtbrP50284 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
LtbrP50284 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.9
LtbrP50284 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
LtbrP50284 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LtbrP50284 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
LtbrP50284 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC20.64■□□□□ 0.89
LtbrP50284 Gm21559-201ENSMUST00000220638 855 ntBASIC20.64■□□□□ 0.89
LtbrP50284 Gm8587-201ENSMUST00000076538 843 ntBASIC20.64■□□□□ 0.89
LtbrP50284 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LtbrP50284 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC20.64■□□□□ 0.89
LtbrP50284 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LtbrP50284 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LtbrP50284 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
LtbrP50284 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
LtbrP50284 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LtbrP50284 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC20.63■□□□□ 0.89
LtbrP50284 Gm9013-201ENSMUST00000132939 882 ntBASIC20.63■□□□□ 0.89
LtbrP50284 Gm18958-201ENSMUST00000174258 762 ntBASIC20.63■□□□□ 0.89
LtbrP50284 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC20.63■□□□□ 0.89
LtbrP50284 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC20.63■□□□□ 0.89
LtbrP50284 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
LtbrP50284 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LtbrP50284 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LtbrP50284 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LtbrP50284 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
LtbrP50284 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
LtbrP50284 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
LtbrP50284 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LtbrP50284 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LtbrP50284 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LtbrP50284 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LtbrP50284 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
LtbrP50284 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LtbrP50284 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LtbrP50284 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
LtbrP50284 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
LtbrP50284 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
LtbrP50284 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LtbrP50284 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LtbrP50284 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LtbrP50284 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
LtbrP50284 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
LtbrP50284 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC20.61■□□□□ 0.89
LtbrP50284 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LtbrP50284 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LtbrP50284 Gm17808-201ENSMUST00000200859 894 ntBASIC20.61■□□□□ 0.89
LtbrP50284 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC20.61■□□□□ 0.89
LtbrP50284 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LtbrP50284 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LtbrP50284 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
LtbrP50284 AC123834.2-201ENSMUST00000224038 2340 ntBASIC20.61■□□□□ 0.89
LtbrP50284 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LtbrP50284 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LtbrP50284 Gm45906-201ENSMUST00000208911 1430 ntBASIC20.61■□□□□ 0.89
LtbrP50284 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LtbrP50284 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LtbrP50284 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
LtbrP50284 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
LtbrP50284 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
LtbrP50284 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LtbrP50284 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
LtbrP50284 Rarb-207ENSMUST00000225921 2756 ntBASIC20.6■□□□□ 0.89
LtbrP50284 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
LtbrP50284 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LtbrP50284 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LtbrP50284 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
LtbrP50284 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
LtbrP50284 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
LtbrP50284 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
LtbrP50284 Gm37444-201ENSMUST00000193605 439 ntBASIC20.59■□□□□ 0.89
LtbrP50284 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LtbrP50284 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.59■□□□□ 0.89
LtbrP50284 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LtbrP50284 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LtbrP50284 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LtbrP50284 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LtbrP50284 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
LtbrP50284 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
LtbrP50284 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
LtbrP50284 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LtbrP50284 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms