Protein–RNA interactions for Protein: P46935

Nedd4, E3 ubiquitin-protein ligase NEDD4, mousemouse

Known RBP Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd4P46935 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nedd4P46935 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC21.19■□□□□ 0.98
Nedd4P46935 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nedd4P46935 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nedd4P46935 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nedd4P46935 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nedd4P46935 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nedd4P46935 Gm11452-201ENSMUST00000122376 690 ntBASIC21.18■□□□□ 0.98
Nedd4P46935 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC21.18■□□□□ 0.98
Nedd4P46935 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Nedd4P46935 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC21.18■□□□□ 0.98
Nedd4P46935 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC21.18■□□□□ 0.98
Nedd4P46935 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Nedd4P46935 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nedd4P46935 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nedd4P46935 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nedd4P46935 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nedd4P46935 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC21.18■□□□□ 0.98
Nedd4P46935 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC21.17■□□□□ 0.98
Nedd4P46935 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Nedd4P46935 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nedd4P46935 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nedd4P46935 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nedd4P46935 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Nedd4P46935 Gm18206-201ENSMUST00000207027 926 ntBASIC21.17■□□□□ 0.98
Nedd4P46935 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nedd4P46935 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Nedd4P46935 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Nedd4P46935 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Nedd4P46935 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC21.17■□□□□ 0.98
Nedd4P46935 Actl10-202ENSMUST00000226583 1501 ntBASIC21.17■□□□□ 0.98
Nedd4P46935 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Nedd4P46935 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nedd4P46935 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Nedd4P46935 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Nedd4P46935 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nedd4P46935 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nedd4P46935 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Nedd4P46935 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Nedd4P46935 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nedd4P46935 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC21.16■□□□□ 0.98
Nedd4P46935 Gm15794-201ENSMUST00000120182 631 ntBASIC21.16■□□□□ 0.98
Nedd4P46935 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC21.16■□□□□ 0.98
Nedd4P46935 AC124569.2-201ENSMUST00000225998 818 ntBASIC21.16■□□□□ 0.98
Nedd4P46935 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nedd4P46935 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Nedd4P46935 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Nedd4P46935 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Nedd4P46935 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nedd4P46935 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nedd4P46935 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nedd4P46935 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
Nedd4P46935 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC21.15■□□□□ 0.98
Nedd4P46935 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nedd4P46935 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nedd4P46935 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nedd4P46935 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC21.15■□□□□ 0.98
Nedd4P46935 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC21.15■□□□□ 0.98
Nedd4P46935 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC21.15■□□□□ 0.98
Nedd4P46935 Gm18688-201ENSMUST00000204695 1859 ntBASIC21.15■□□□□ 0.98
Nedd4P46935 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Nedd4P46935 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Nedd4P46935 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Nedd4P46935 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Nedd4P46935 Gm10418-201ENSMUST00000100943 576 ntBASIC21.14■□□□□ 0.97
Nedd4P46935 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nedd4P46935 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Nedd4P46935 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nedd4P46935 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Nedd4P46935 Gm12895-201ENSMUST00000122214 226 ntBASIC21.14■□□□□ 0.97
Nedd4P46935 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC21.14■□□□□ 0.97
Nedd4P46935 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nedd4P46935 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Nedd4P46935 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nedd4P46935 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nedd4P46935 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Nedd4P46935 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Nedd4P46935 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Nedd4P46935 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nedd4P46935 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.13■□□□□ 0.97
Nedd4P46935 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Nedd4P46935 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Nedd4P46935 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nedd4P46935 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nedd4P46935 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC21.13■□□□□ 0.97
Nedd4P46935 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nedd4P46935 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nedd4P46935 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nedd4P46935 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nedd4P46935 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nedd4P46935 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nedd4P46935 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Nedd4P46935 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC21.12■□□□□ 0.97
Nedd4P46935 Gm18195-201ENSMUST00000207604 706 ntBASIC21.12■□□□□ 0.97
Nedd4P46935 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Nedd4P46935 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC21.12■□□□□ 0.97
Nedd4P46935 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nedd4P46935 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nedd4P46935 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Nedd4P46935 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms