Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.15■□□□□ 0.5
Cxcl12P40224 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.15■□□□□ 0.5
Cxcl12P40224 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Cxcl12P40224 Actl10-202ENSMUST00000226583 1501 ntBASIC18.15■□□□□ 0.5
Cxcl12P40224 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Cxcl12P40224 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC18.15■□□□□ 0.5
Cxcl12P40224 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC18.15■□□□□ 0.5
Cxcl12P40224 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.15■□□□□ 0.5
Cxcl12P40224 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cxcl12P40224 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cxcl12P40224 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cxcl12P40224 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Cxcl12P40224 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cxcl12P40224 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cxcl12P40224 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cxcl12P40224 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cxcl12P40224 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cxcl12P40224 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cxcl12P40224 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cxcl12P40224 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cxcl12P40224 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cxcl12P40224 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cxcl12P40224 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC18.14■□□□□ 0.49
Cxcl12P40224 Gm29791-202ENSMUST00000207888 369 ntBASIC18.14■□□□□ 0.49
Cxcl12P40224 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Cxcl12P40224 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Cxcl12P40224 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cxcl12P40224 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cxcl12P40224 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cxcl12P40224 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cxcl12P40224 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cxcl12P40224 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cxcl12P40224 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.13■□□□□ 0.49
Cxcl12P40224 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Cxcl12P40224 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cxcl12P40224 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC18.13■□□□□ 0.49
Cxcl12P40224 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cxcl12P40224 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cxcl12P40224 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cxcl12P40224 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cxcl12P40224 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cxcl12P40224 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cxcl12P40224 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cxcl12P40224 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Cxcl12P40224 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC18.12■□□□□ 0.49
Cxcl12P40224 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cxcl12P40224 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cxcl12P40224 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cxcl12P40224 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cxcl12P40224 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cxcl12P40224 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cxcl12P40224 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cxcl12P40224 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cxcl12P40224 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cxcl12P40224 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC18.11■□□□□ 0.49
Cxcl12P40224 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC18.11■□□□□ 0.49
Cxcl12P40224 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.11■□□□□ 0.49
Cxcl12P40224 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cxcl12P40224 Gm18195-201ENSMUST00000207604 706 ntBASIC18.11■□□□□ 0.49
Cxcl12P40224 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cxcl12P40224 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC18.11■□□□□ 0.49
Cxcl12P40224 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cxcl12P40224 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Cxcl12P40224 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cxcl12P40224 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
Cxcl12P40224 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Cxcl12P40224 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.11■□□□□ 0.49
Cxcl12P40224 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Cxcl12P40224 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cxcl12P40224 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cxcl12P40224 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Cxcl12P40224 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.1■□□□□ 0.49
Cxcl12P40224 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cxcl12P40224 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cxcl12P40224 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cxcl12P40224 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cxcl12P40224 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cxcl12P40224 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cxcl12P40224 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cxcl12P40224 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Cxcl12P40224 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cxcl12P40224 Gm11452-201ENSMUST00000122376 690 ntBASIC18.1■□□□□ 0.49
Cxcl12P40224 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cxcl12P40224 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC18.1■□□□□ 0.49
Cxcl12P40224 Gm37935-201ENSMUST00000192012 982 ntBASIC18.1■□□□□ 0.49
Cxcl12P40224 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC18.1■□□□□ 0.49
Cxcl12P40224 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cxcl12P40224 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cxcl12P40224 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cxcl12P40224 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cxcl12P40224 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.09■□□□□ 0.49
Cxcl12P40224 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cxcl12P40224 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Cxcl12P40224 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.09■□□□□ 0.49
Cxcl12P40224 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.09■□□□□ 0.49
Cxcl12P40224 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cxcl12P40224 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cxcl12P40224 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cxcl12P40224 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cxcl12P40224 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms