Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Fen1P39749 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Fen1P39749 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Fen1P39749 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Fen1P39749 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Fen1P39749 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Fen1P39749 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Fen1P39749 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Fen1P39749 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.7■□□□□ 0.42
Fen1P39749 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Fen1P39749 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Fen1P39749 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Fen1P39749 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Fen1P39749 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Fen1P39749 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Fen1P39749 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Fen1P39749 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Fen1P39749 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Fen1P39749 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Fen1P39749 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Fen1P39749 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Fen1P39749 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Fen1P39749 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Fen1P39749 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Fen1P39749 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
Fen1P39749 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Fen1P39749 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Fen1P39749 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
Fen1P39749 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Fen1P39749 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.69■□□□□ 0.42
Fen1P39749 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Fen1P39749 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Fen1P39749 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Fen1P39749 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Fen1P39749 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.69■□□□□ 0.42
Fen1P39749 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Fen1P39749 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Fen1P39749 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Fen1P39749 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Fen1P39749 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Fen1P39749 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Fen1P39749 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Fen1P39749 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Fen1P39749 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.68■□□□□ 0.42
Fen1P39749 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Fen1P39749 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Fen1P39749 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.68■□□□□ 0.42
Fen1P39749 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Fen1P39749 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.68■□□□□ 0.42
Fen1P39749 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Fen1P39749 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Fen1P39749 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Fen1P39749 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Fen1P39749 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Fen1P39749 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Fen1P39749 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Fen1P39749 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.67■□□□□ 0.42
Fen1P39749 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Fen1P39749 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Fen1P39749 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Fen1P39749 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Fen1P39749 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Fen1P39749 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Fen1P39749 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.67■□□□□ 0.42
Fen1P39749 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Fen1P39749 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Fen1P39749 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.67■□□□□ 0.42
Fen1P39749 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Fen1P39749 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Fen1P39749 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.67■□□□□ 0.42
Fen1P39749 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Fen1P39749 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Fen1P39749 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Fen1P39749 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Fen1P39749 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Fen1P39749 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Fen1P39749 Gm13146-201ENSMUST00000118508 780 ntBASIC17.66■□□□□ 0.42
Fen1P39749 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Fen1P39749 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Fen1P39749 Gm8969-201ENSMUST00000199694 526 ntBASIC17.66■□□□□ 0.42
Fen1P39749 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.66■□□□□ 0.42
Fen1P39749 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.66■□□□□ 0.42
Fen1P39749 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Fen1P39749 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
Fen1P39749 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Fen1P39749 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Fen1P39749 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Fen1P39749 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
Fen1P39749 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Fen1P39749 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Fen1P39749 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Fen1P39749 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Fen1P39749 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Fen1P39749 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Fen1P39749 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Fen1P39749 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Fen1P39749 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Fen1P39749 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Fen1P39749 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.65■□□□□ 0.42
Fen1P39749 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms