Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col4a2P08122 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC16.43■□□□□ 0.22
Col4a2P08122 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Col4a2P08122 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Col4a2P08122 Gm27389-201ENSMUST00000183622 195 ntBASIC16.43■□□□□ 0.22
Col4a2P08122 Gm21559-201ENSMUST00000220638 855 ntBASIC16.43■□□□□ 0.22
Col4a2P08122 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col4a2P08122 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col4a2P08122 Gm8587-201ENSMUST00000076538 843 ntBASIC16.43■□□□□ 0.22
Col4a2P08122 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Col4a2P08122 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col4a2P08122 Idnk-204ENSMUST00000226010 1898 ntBASIC16.43■□□□□ 0.22
Col4a2P08122 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col4a2P08122 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Col4a2P08122 Mir8112-201ENSMUST00000184382 131 ntBASIC16.42■□□□□ 0.22
Col4a2P08122 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Col4a2P08122 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col4a2P08122 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col4a2P08122 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.42■□□□□ 0.22
Col4a2P08122 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col4a2P08122 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC16.42■□□□□ 0.22
Col4a2P08122 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col4a2P08122 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col4a2P08122 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col4a2P08122 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Col4a2P08122 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col4a2P08122 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col4a2P08122 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Col4a2P08122 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Col4a2P08122 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Col4a2P08122 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col4a2P08122 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col4a2P08122 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Col4a2P08122 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.41■□□□□ 0.22
Col4a2P08122 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Col4a2P08122 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col4a2P08122 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col4a2P08122 Gm29791-202ENSMUST00000207888 369 ntBASIC16.41■□□□□ 0.22
Col4a2P08122 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col4a2P08122 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col4a2P08122 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.41■□□□□ 0.22
Col4a2P08122 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Col4a2P08122 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Col4a2P08122 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Col4a2P08122 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Col4a2P08122 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col4a2P08122 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col4a2P08122 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Col4a2P08122 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col4a2P08122 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Col4a2P08122 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col4a2P08122 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Col4a2P08122 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Col4a2P08122 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Col4a2P08122 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col4a2P08122 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col4a2P08122 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Col4a2P08122 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col4a2P08122 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col4a2P08122 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Col4a2P08122 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.4■□□□□ 0.22
Col4a2P08122 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Col4a2P08122 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col4a2P08122 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col4a2P08122 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Col4a2P08122 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Col4a2P08122 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Col4a2P08122 Gm11950-201ENSMUST00000121615 838 ntBASIC16.39■□□□□ 0.21
Col4a2P08122 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Col4a2P08122 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Col4a2P08122 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col4a2P08122 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col4a2P08122 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col4a2P08122 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Col4a2P08122 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col4a2P08122 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col4a2P08122 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Col4a2P08122 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Col4a2P08122 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Col4a2P08122 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Col4a2P08122 Gm18958-201ENSMUST00000174258 762 ntBASIC16.39■□□□□ 0.21
Col4a2P08122 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Col4a2P08122 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col4a2P08122 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col4a2P08122 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.38■□□□□ 0.21
Col4a2P08122 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col4a2P08122 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col4a2P08122 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col4a2P08122 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col4a2P08122 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Col4a2P08122 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Col4a2P08122 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.38■□□□□ 0.21
Col4a2P08122 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.38■□□□□ 0.21
Col4a2P08122 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.38■□□□□ 0.21
Col4a2P08122 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Col4a2P08122 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Col4a2P08122 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col4a2P08122 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col4a2P08122 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col4a2P08122 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms