Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hcn3O88705 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hcn3O88705 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hcn3O88705 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hcn3O88705 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hcn3O88705 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hcn3O88705 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hcn3O88705 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Hcn3O88705 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hcn3O88705 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC16.85■□□□□ 0.29
Hcn3O88705 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC16.85■□□□□ 0.29
Hcn3O88705 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hcn3O88705 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Hcn3O88705 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hcn3O88705 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hcn3O88705 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hcn3O88705 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hcn3O88705 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Hcn3O88705 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hcn3O88705 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
Hcn3O88705 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hcn3O88705 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.84■□□□□ 0.29
Hcn3O88705 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.84■□□□□ 0.29
Hcn3O88705 Gm26971-201ENSMUST00000182423 1072 ntBASIC16.84■□□□□ 0.29
Hcn3O88705 Gm42642-201ENSMUST00000200683 355 ntBASIC16.84■□□□□ 0.29
Hcn3O88705 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hcn3O88705 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Hcn3O88705 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hcn3O88705 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.83■□□□□ 0.28
Hcn3O88705 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.83■□□□□ 0.28
Hcn3O88705 Gm13216-201ENSMUST00000117145 591 ntBASIC16.83■□□□□ 0.28
Hcn3O88705 Gm13234-201ENSMUST00000120010 747 ntBASIC16.83■□□□□ 0.28
Hcn3O88705 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Hcn3O88705 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Hcn3O88705 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Hcn3O88705 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Hcn3O88705 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC16.83■□□□□ 0.28
Hcn3O88705 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Hcn3O88705 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hcn3O88705 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hcn3O88705 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hcn3O88705 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hcn3O88705 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hcn3O88705 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hcn3O88705 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hcn3O88705 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Hcn3O88705 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Hcn3O88705 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hcn3O88705 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Hcn3O88705 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hcn3O88705 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.82■□□□□ 0.28
Hcn3O88705 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hcn3O88705 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hcn3O88705 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hcn3O88705 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Hcn3O88705 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC16.82■□□□□ 0.28
Hcn3O88705 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Hcn3O88705 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hcn3O88705 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC16.82■□□□□ 0.28
Hcn3O88705 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC16.82■□□□□ 0.28
Hcn3O88705 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hcn3O88705 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hcn3O88705 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hcn3O88705 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hcn3O88705 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Hcn3O88705 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Hcn3O88705 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hcn3O88705 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hcn3O88705 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hcn3O88705 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hcn3O88705 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hcn3O88705 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.81■□□□□ 0.28
Hcn3O88705 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hcn3O88705 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hcn3O88705 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hcn3O88705 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC16.81■□□□□ 0.28
Hcn3O88705 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hcn3O88705 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.81■□□□□ 0.28
Hcn3O88705 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hcn3O88705 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Hcn3O88705 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hcn3O88705 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hcn3O88705 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hcn3O88705 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.81■□□□□ 0.28
Hcn3O88705 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hcn3O88705 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hcn3O88705 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hcn3O88705 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.8■□□□□ 0.28
Hcn3O88705 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hcn3O88705 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hcn3O88705 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Hcn3O88705 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Hcn3O88705 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Hcn3O88705 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Hcn3O88705 Gm18671-201ENSMUST00000214826 683 ntBASIC16.8■□□□□ 0.28
Hcn3O88705 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hcn3O88705 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Hcn3O88705 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hcn3O88705 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hcn3O88705 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms