Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tgfbr3O88393 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Tgfbr3O88393 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC16.72■□□□□ 0.27
Tgfbr3O88393 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tgfbr3O88393 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tgfbr3O88393 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.72■□□□□ 0.27
Tgfbr3O88393 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tgfbr3O88393 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Tgfbr3O88393 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tgfbr3O88393 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tgfbr3O88393 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tgfbr3O88393 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tgfbr3O88393 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Tgfbr3O88393 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tgfbr3O88393 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Tgfbr3O88393 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tgfbr3O88393 Gm27704-201ENSMUST00000185094 107 ntBASIC16.71■□□□□ 0.27
Tgfbr3O88393 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Tgfbr3O88393 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Tgfbr3O88393 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Tgfbr3O88393 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tgfbr3O88393 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tgfbr3O88393 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Tgfbr3O88393 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC16.71■□□□□ 0.26
Tgfbr3O88393 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Tgfbr3O88393 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tgfbr3O88393 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tgfbr3O88393 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tgfbr3O88393 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Tgfbr3O88393 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tgfbr3O88393 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC16.7■□□□□ 0.26
Tgfbr3O88393 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tgfbr3O88393 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Tgfbr3O88393 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC16.7■□□□□ 0.26
Tgfbr3O88393 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tgfbr3O88393 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tgfbr3O88393 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Tgfbr3O88393 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tgfbr3O88393 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.69■□□□□ 0.26
Tgfbr3O88393 Gm9013-201ENSMUST00000132939 882 ntBASIC16.69■□□□□ 0.26
Tgfbr3O88393 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
Tgfbr3O88393 Gm9731-201ENSMUST00000209480 747 ntBASIC16.69■□□□□ 0.26
Tgfbr3O88393 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Tgfbr3O88393 Gm7213-201ENSMUST00000215977 950 ntBASIC16.69■□□□□ 0.26
Tgfbr3O88393 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Tgfbr3O88393 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tgfbr3O88393 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tgfbr3O88393 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Tgfbr3O88393 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tgfbr3O88393 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tgfbr3O88393 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tgfbr3O88393 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tgfbr3O88393 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Tgfbr3O88393 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Tgfbr3O88393 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tgfbr3O88393 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC16.68■□□□□ 0.26
Tgfbr3O88393 Gm29518-201ENSMUST00000190858 372 ntBASIC16.68■□□□□ 0.26
Tgfbr3O88393 Il3ra-202ENSMUST00000223589 738 ntBASIC16.68■□□□□ 0.26
Tgfbr3O88393 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Tgfbr3O88393 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tgfbr3O88393 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tgfbr3O88393 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Tgfbr3O88393 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tgfbr3O88393 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tgfbr3O88393 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Tgfbr3O88393 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tgfbr3O88393 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tgfbr3O88393 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Tgfbr3O88393 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tgfbr3O88393 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tgfbr3O88393 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tgfbr3O88393 Gm5784-201ENSMUST00000179344 2478 ntBASIC16.67■□□□□ 0.26
Tgfbr3O88393 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tgfbr3O88393 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Tgfbr3O88393 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.67■□□□□ 0.26
Tgfbr3O88393 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC16.67■□□□□ 0.26
Tgfbr3O88393 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.67■□□□□ 0.26
Tgfbr3O88393 Gm17971-201ENSMUST00000190239 806 ntBASIC16.67■□□□□ 0.26
Tgfbr3O88393 Gm37025-201ENSMUST00000195159 829 ntBASIC16.67■□□□□ 0.26
Tgfbr3O88393 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tgfbr3O88393 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tgfbr3O88393 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tgfbr3O88393 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tgfbr3O88393 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tgfbr3O88393 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Tgfbr3O88393 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tgfbr3O88393 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tgfbr3O88393 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tgfbr3O88393 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tgfbr3O88393 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tgfbr3O88393 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tgfbr3O88393 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tgfbr3O88393 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tgfbr3O88393 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tgfbr3O88393 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tgfbr3O88393 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
Tgfbr3O88393 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.66■□□□□ 0.26
Tgfbr3O88393 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.66■□□□□ 0.26
Tgfbr3O88393 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.66■□□□□ 0.26
Tgfbr3O88393 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms