Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SncaO55042 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SncaO55042 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SncaO55042 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC14.58□□□□□ -0.08
SncaO55042 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
SncaO55042 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SncaO55042 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
SncaO55042 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SncaO55042 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SncaO55042 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SncaO55042 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
SncaO55042 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SncaO55042 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SncaO55042 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SncaO55042 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
SncaO55042 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SncaO55042 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
SncaO55042 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SncaO55042 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SncaO55042 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SncaO55042 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
SncaO55042 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SncaO55042 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.57□□□□□ -0.08
SncaO55042 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC14.57□□□□□ -0.08
SncaO55042 Gm5898-201ENSMUST00000121016 2071 ntBASIC14.57□□□□□ -0.08
SncaO55042 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SncaO55042 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SncaO55042 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SncaO55042 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
SncaO55042 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SncaO55042 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SncaO55042 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
SncaO55042 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SncaO55042 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SncaO55042 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
SncaO55042 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC14.56□□□□□ -0.08
SncaO55042 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
SncaO55042 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SncaO55042 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SncaO55042 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SncaO55042 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SncaO55042 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SncaO55042 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SncaO55042 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
SncaO55042 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
SncaO55042 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC14.56□□□□□ -0.08
SncaO55042 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SncaO55042 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SncaO55042 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
SncaO55042 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
SncaO55042 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
SncaO55042 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
SncaO55042 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SncaO55042 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
SncaO55042 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SncaO55042 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
SncaO55042 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SncaO55042 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SncaO55042 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SncaO55042 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SncaO55042 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
SncaO55042 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SncaO55042 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
SncaO55042 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SncaO55042 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
SncaO55042 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC14.55□□□□□ -0.08
SncaO55042 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SncaO55042 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
SncaO55042 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SncaO55042 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SncaO55042 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SncaO55042 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SncaO55042 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SncaO55042 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SncaO55042 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
SncaO55042 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SncaO55042 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SncaO55042 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC14.54□□□□□ -0.08
SncaO55042 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SncaO55042 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SncaO55042 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SncaO55042 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SncaO55042 Gm37194-201ENSMUST00000193092 3031 ntBASIC14.54□□□□□ -0.08
SncaO55042 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SncaO55042 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
SncaO55042 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
SncaO55042 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC14.54□□□□□ -0.08
SncaO55042 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC14.54□□□□□ -0.08
SncaO55042 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC14.54□□□□□ -0.08
SncaO55042 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SncaO55042 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SncaO55042 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SncaO55042 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC14.54□□□□□ -0.08
SncaO55042 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC14.54□□□□□ -0.08
SncaO55042 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SncaO55042 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SncaO55042 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SncaO55042 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SncaO55042 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
SncaO55042 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms