Protein–RNA interactions for Protein: O54962

Banf1, Barrier-to-autointegration factor, mousemouse

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Banf1O54962 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Banf1O54962 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.91■□□□□ 0.46
Banf1O54962 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Banf1O54962 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Banf1O54962 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.9■□□□□ 0.46
Banf1O54962 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.9■□□□□ 0.46
Banf1O54962 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Banf1O54962 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Banf1O54962 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Banf1O54962 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Banf1O54962 Gm18284-201ENSMUST00000172604 624 ntBASIC17.9■□□□□ 0.46
Banf1O54962 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Banf1O54962 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Banf1O54962 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.9■□□□□ 0.46
Banf1O54962 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.9■□□□□ 0.46
Banf1O54962 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.9■□□□□ 0.46
Banf1O54962 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Banf1O54962 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Banf1O54962 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
Banf1O54962 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Banf1O54962 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Banf1O54962 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Banf1O54962 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Banf1O54962 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Banf1O54962 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Banf1O54962 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.89■□□□□ 0.45
Banf1O54962 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.89■□□□□ 0.45
Banf1O54962 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Banf1O54962 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.88■□□□□ 0.45
Banf1O54962 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Banf1O54962 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Banf1O54962 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
Banf1O54962 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Banf1O54962 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Banf1O54962 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Banf1O54962 Gm2399-201ENSMUST00000104944 225 ntBASIC17.88■□□□□ 0.45
Banf1O54962 Gm13148-201ENSMUST00000118892 745 ntBASIC17.88■□□□□ 0.45
Banf1O54962 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.88■□□□□ 0.45
Banf1O54962 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.88■□□□□ 0.45
Banf1O54962 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.88■□□□□ 0.45
Banf1O54962 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Banf1O54962 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Banf1O54962 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Banf1O54962 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Banf1O54962 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Banf1O54962 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Banf1O54962 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Banf1O54962 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Banf1O54962 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.87■□□□□ 0.45
Banf1O54962 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Banf1O54962 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Banf1O54962 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Banf1O54962 Gm38285-201ENSMUST00000192928 922 ntBASIC17.87■□□□□ 0.45
Banf1O54962 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Banf1O54962 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Banf1O54962 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Banf1O54962 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Banf1O54962 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Banf1O54962 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Banf1O54962 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Banf1O54962 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.87■□□□□ 0.45
Banf1O54962 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Banf1O54962 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Banf1O54962 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Banf1O54962 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Banf1O54962 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Banf1O54962 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Banf1O54962 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Banf1O54962 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Banf1O54962 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Banf1O54962 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Banf1O54962 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Banf1O54962 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Banf1O54962 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Banf1O54962 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Banf1O54962 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.86■□□□□ 0.45
Banf1O54962 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.86■□□□□ 0.45
Banf1O54962 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Banf1O54962 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Banf1O54962 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Banf1O54962 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Banf1O54962 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Banf1O54962 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Banf1O54962 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Banf1O54962 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Banf1O54962 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Banf1O54962 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Banf1O54962 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Banf1O54962 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Banf1O54962 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Banf1O54962 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Banf1O54962 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Banf1O54962 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Banf1O54962 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Banf1O54962 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.85■□□□□ 0.45
Banf1O54962 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Banf1O54962 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Banf1O54962 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Banf1O54962 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Banf1O54962 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms