Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Npc1O35604 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Npc1O35604 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Npc1O35604 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Npc1O35604 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Npc1O35604 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Npc1O35604 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.15■□□□□ 0.34
Npc1O35604 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Npc1O35604 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Npc1O35604 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Npc1O35604 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Npc1O35604 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.14■□□□□ 0.33
Npc1O35604 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.14■□□□□ 0.33
Npc1O35604 Gm43183-201ENSMUST00000200632 547 ntBASIC17.14■□□□□ 0.33
Npc1O35604 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.14■□□□□ 0.33
Npc1O35604 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Npc1O35604 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Npc1O35604 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Npc1O35604 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Npc1O35604 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Npc1O35604 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Npc1O35604 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
Npc1O35604 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Npc1O35604 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Npc1O35604 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.13■□□□□ 0.33
Npc1O35604 Gm12382-201ENSMUST00000122005 922 ntBASIC17.13■□□□□ 0.33
Npc1O35604 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Npc1O35604 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.13■□□□□ 0.33
Npc1O35604 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Npc1O35604 Gm42545-201ENSMUST00000202755 922 ntBASIC17.13■□□□□ 0.33
Npc1O35604 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.13■□□□□ 0.33
Npc1O35604 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.13■□□□□ 0.33
Npc1O35604 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Npc1O35604 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Npc1O35604 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Npc1O35604 Tgds-204ENSMUST00000228543 1594 ntBASIC17.13■□□□□ 0.33
Npc1O35604 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Npc1O35604 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Npc1O35604 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Npc1O35604 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Npc1O35604 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Npc1O35604 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Npc1O35604 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Npc1O35604 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Npc1O35604 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
Npc1O35604 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Npc1O35604 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.12■□□□□ 0.33
Npc1O35604 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Npc1O35604 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Npc1O35604 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
Npc1O35604 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.12■□□□□ 0.33
Npc1O35604 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.12■□□□□ 0.33
Npc1O35604 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Npc1O35604 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Npc1O35604 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Npc1O35604 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Npc1O35604 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.12■□□□□ 0.33
Npc1O35604 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.12■□□□□ 0.33
Npc1O35604 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Npc1O35604 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Npc1O35604 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Npc1O35604 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Npc1O35604 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Npc1O35604 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.11■□□□□ 0.33
Npc1O35604 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Npc1O35604 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Npc1O35604 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Npc1O35604 Gm715-201ENSMUST00000117865 831 ntBASIC17.11■□□□□ 0.33
Npc1O35604 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.11■□□□□ 0.33
Npc1O35604 Gm37292-201ENSMUST00000192062 758 ntBASIC17.11■□□□□ 0.33
Npc1O35604 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Npc1O35604 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Npc1O35604 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.11■□□□□ 0.33
Npc1O35604 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Npc1O35604 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Npc1O35604 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Npc1O35604 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Npc1O35604 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.11■□□□□ 0.33
Npc1O35604 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
Npc1O35604 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Npc1O35604 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Npc1O35604 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Npc1O35604 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.1■□□□□ 0.33
Npc1O35604 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Npc1O35604 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Npc1O35604 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Npc1O35604 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Npc1O35604 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Npc1O35604 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Npc1O35604 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Npc1O35604 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.1■□□□□ 0.33
Npc1O35604 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Npc1O35604 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Npc1O35604 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Npc1O35604 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Npc1O35604 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Npc1O35604 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Npc1O35604 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Npc1O35604 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Npc1O35604 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms