Protein–RNA interactions for Protein: O35493

Clk4, Dual specificity protein kinase CLK4, mousemouse

Predictions only

Length 481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk4O35493 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Clk4O35493 Haglr-201ENSMUST00000100000 2085 ntBASIC16.87■□□□□ 0.29
Clk4O35493 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clk4O35493 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.87■□□□□ 0.29
Clk4O35493 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clk4O35493 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clk4O35493 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clk4O35493 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clk4O35493 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clk4O35493 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clk4O35493 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clk4O35493 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clk4O35493 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clk4O35493 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clk4O35493 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.86■□□□□ 0.29
Clk4O35493 Alkbh1-212ENSMUST00000185301 408 ntBASIC16.86■□□□□ 0.29
Clk4O35493 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clk4O35493 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clk4O35493 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clk4O35493 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Clk4O35493 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Clk4O35493 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clk4O35493 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clk4O35493 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Clk4O35493 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clk4O35493 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clk4O35493 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clk4O35493 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clk4O35493 Gm27011-201ENSMUST00000182352 972 ntBASIC16.85■□□□□ 0.29
Clk4O35493 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC16.85■□□□□ 0.29
Clk4O35493 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clk4O35493 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clk4O35493 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clk4O35493 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clk4O35493 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clk4O35493 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Clk4O35493 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clk4O35493 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clk4O35493 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clk4O35493 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Clk4O35493 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
Clk4O35493 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Clk4O35493 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC16.84■□□□□ 0.29
Clk4O35493 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Clk4O35493 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.84■□□□□ 0.29
Clk4O35493 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clk4O35493 Gm13168-201ENSMUST00000121771 632 ntBASIC16.84■□□□□ 0.29
Clk4O35493 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Clk4O35493 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clk4O35493 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clk4O35493 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC16.84■□□□□ 0.29
Clk4O35493 Nrn1-203ENSMUST00000223611 1443 ntBASIC16.84■□□□□ 0.29
Clk4O35493 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clk4O35493 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clk4O35493 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Clk4O35493 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Clk4O35493 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Clk4O35493 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Clk4O35493 Gm15375-201ENSMUST00000119510 849 ntBASIC16.83■□□□□ 0.28
Clk4O35493 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Clk4O35493 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
Clk4O35493 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Clk4O35493 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Clk4O35493 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Clk4O35493 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Clk4O35493 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Clk4O35493 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Clk4O35493 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Clk4O35493 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Clk4O35493 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clk4O35493 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Clk4O35493 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clk4O35493 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clk4O35493 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Clk4O35493 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clk4O35493 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Clk4O35493 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Clk4O35493 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.82■□□□□ 0.28
Clk4O35493 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Clk4O35493 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.82■□□□□ 0.28
Clk4O35493 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clk4O35493 AC112142.1-201ENSMUST00000228796 918 ntBASIC16.82■□□□□ 0.28
Clk4O35493 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clk4O35493 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clk4O35493 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clk4O35493 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clk4O35493 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clk4O35493 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clk4O35493 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clk4O35493 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.81■□□□□ 0.28
Clk4O35493 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Clk4O35493 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Clk4O35493 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Clk4O35493 Gm10418-201ENSMUST00000100943 576 ntBASIC16.81■□□□□ 0.28
Clk4O35493 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Clk4O35493 Gm15378-201ENSMUST00000121894 207 ntBASIC16.81■□□□□ 0.28
Clk4O35493 Gm22240-201ENSMUST00000175225 82 ntBASIC16.81■□□□□ 0.28
Clk4O35493 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16.81■□□□□ 0.28
Clk4O35493 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.81■□□□□ 0.28
Clk4O35493 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms