Protein–RNA interactions for Protein: O35218

Cpsf2, Cleavage and polyadenylation specificity factor subunit 2, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf2O35218 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cpsf2O35218 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cpsf2O35218 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cpsf2O35218 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cpsf2O35218 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cpsf2O35218 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Cpsf2O35218 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cpsf2O35218 Gm6211-202ENSMUST00000167849 925 ntBASIC18.8■□□□□ 0.6
Cpsf2O35218 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cpsf2O35218 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC18.8■□□□□ 0.6
Cpsf2O35218 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cpsf2O35218 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cpsf2O35218 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cpsf2O35218 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.79■□□□□ 0.6
Cpsf2O35218 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cpsf2O35218 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.79■□□□□ 0.6
Cpsf2O35218 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cpsf2O35218 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cpsf2O35218 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Cpsf2O35218 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cpsf2O35218 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cpsf2O35218 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.79■□□□□ 0.6
Cpsf2O35218 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cpsf2O35218 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Cpsf2O35218 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cpsf2O35218 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cpsf2O35218 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Cpsf2O35218 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cpsf2O35218 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Cpsf2O35218 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.79■□□□□ 0.6
Cpsf2O35218 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cpsf2O35218 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.79■□□□□ 0.6
Cpsf2O35218 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cpsf2O35218 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Cpsf2O35218 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cpsf2O35218 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cpsf2O35218 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cpsf2O35218 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cpsf2O35218 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cpsf2O35218 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Cpsf2O35218 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cpsf2O35218 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cpsf2O35218 Gm8969-201ENSMUST00000199694 526 ntBASIC18.78■□□□□ 0.6
Cpsf2O35218 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cpsf2O35218 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cpsf2O35218 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cpsf2O35218 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cpsf2O35218 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cpsf2O35218 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Cpsf2O35218 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cpsf2O35218 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC18.77■□□□□ 0.6
Cpsf2O35218 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cpsf2O35218 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cpsf2O35218 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cpsf2O35218 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.77■□□□□ 0.6
Cpsf2O35218 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cpsf2O35218 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.77■□□□□ 0.6
Cpsf2O35218 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Cpsf2O35218 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cpsf2O35218 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.77■□□□□ 0.6
Cpsf2O35218 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cpsf2O35218 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Cpsf2O35218 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Cpsf2O35218 Gm5421-201ENSMUST00000181698 2354 ntBASIC18.77■□□□□ 0.6
Cpsf2O35218 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cpsf2O35218 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Cpsf2O35218 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cpsf2O35218 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.77■□□□□ 0.59
Cpsf2O35218 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cpsf2O35218 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Cpsf2O35218 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cpsf2O35218 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cpsf2O35218 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.76■□□□□ 0.59
Cpsf2O35218 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cpsf2O35218 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cpsf2O35218 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cpsf2O35218 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cpsf2O35218 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cpsf2O35218 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cpsf2O35218 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cpsf2O35218 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cpsf2O35218 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cpsf2O35218 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cpsf2O35218 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.75■□□□□ 0.59
Cpsf2O35218 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cpsf2O35218 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cpsf2O35218 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cpsf2O35218 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cpsf2O35218 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cpsf2O35218 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Cpsf2O35218 Gm7290-201ENSMUST00000104990 617 ntBASIC18.75■□□□□ 0.59
Cpsf2O35218 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Cpsf2O35218 Gm12918-201ENSMUST00000120234 636 ntBASIC18.75■□□□□ 0.59
Cpsf2O35218 Gm15710-201ENSMUST00000121821 636 ntBASIC18.75■□□□□ 0.59
Cpsf2O35218 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.75■□□□□ 0.59
Cpsf2O35218 Gm5075-201ENSMUST00000196916 622 ntBASIC18.75■□□□□ 0.59
Cpsf2O35218 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.75■□□□□ 0.59
Cpsf2O35218 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Cpsf2O35218 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Cpsf2O35218 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms