Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
B020004C17RikJ3QP07 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
B020004C17RikJ3QP07 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
B020004C17RikJ3QP07 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
B020004C17RikJ3QP07 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
B020004C17RikJ3QP07 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
B020004C17RikJ3QP07 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
B020004C17RikJ3QP07 Gm45328-201ENSMUST00000210942 917 ntBASIC19.71■□□□□ 0.75
B020004C17RikJ3QP07 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
B020004C17RikJ3QP07 Gm7461-201ENSMUST00000058918 827 ntBASIC19.71■□□□□ 0.75
B020004C17RikJ3QP07 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
B020004C17RikJ3QP07 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
B020004C17RikJ3QP07 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
B020004C17RikJ3QP07 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
B020004C17RikJ3QP07 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
B020004C17RikJ3QP07 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
B020004C17RikJ3QP07 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
B020004C17RikJ3QP07 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC19.7■□□□□ 0.74
B020004C17RikJ3QP07 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
B020004C17RikJ3QP07 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC19.7■□□□□ 0.74
B020004C17RikJ3QP07 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
B020004C17RikJ3QP07 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
B020004C17RikJ3QP07 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
B020004C17RikJ3QP07 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
B020004C17RikJ3QP07 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
B020004C17RikJ3QP07 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
B020004C17RikJ3QP07 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
B020004C17RikJ3QP07 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
B020004C17RikJ3QP07 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
B020004C17RikJ3QP07 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
B020004C17RikJ3QP07 Mir770-201ENSMUST00000103252 94 ntBASIC19.69■□□□□ 0.74
B020004C17RikJ3QP07 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
B020004C17RikJ3QP07 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
B020004C17RikJ3QP07 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
B020004C17RikJ3QP07 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
B020004C17RikJ3QP07 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
B020004C17RikJ3QP07 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
B020004C17RikJ3QP07 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
B020004C17RikJ3QP07 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.69■□□□□ 0.74
B020004C17RikJ3QP07 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
B020004C17RikJ3QP07 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
B020004C17RikJ3QP07 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
B020004C17RikJ3QP07 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC19.68■□□□□ 0.74
B020004C17RikJ3QP07 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
B020004C17RikJ3QP07 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
B020004C17RikJ3QP07 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
B020004C17RikJ3QP07 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
B020004C17RikJ3QP07 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
B020004C17RikJ3QP07 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
B020004C17RikJ3QP07 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
B020004C17RikJ3QP07 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
B020004C17RikJ3QP07 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.67■□□□□ 0.74
B020004C17RikJ3QP07 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
B020004C17RikJ3QP07 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC19.67■□□□□ 0.74
B020004C17RikJ3QP07 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
B020004C17RikJ3QP07 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
B020004C17RikJ3QP07 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
B020004C17RikJ3QP07 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
B020004C17RikJ3QP07 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
B020004C17RikJ3QP07 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
B020004C17RikJ3QP07 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
B020004C17RikJ3QP07 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
B020004C17RikJ3QP07 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
B020004C17RikJ3QP07 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
B020004C17RikJ3QP07 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
B020004C17RikJ3QP07 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
B020004C17RikJ3QP07 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC19.66■□□□□ 0.74
B020004C17RikJ3QP07 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC19.66■□□□□ 0.74
B020004C17RikJ3QP07 AC122351.1-201ENSMUST00000220467 126 ntBASIC19.66■□□□□ 0.74
B020004C17RikJ3QP07 Gm18115-201ENSMUST00000221209 621 ntBASIC19.66■□□□□ 0.74
B020004C17RikJ3QP07 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC19.66■□□□□ 0.74
B020004C17RikJ3QP07 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
B020004C17RikJ3QP07 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
B020004C17RikJ3QP07 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.66■□□□□ 0.74
B020004C17RikJ3QP07 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
B020004C17RikJ3QP07 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
B020004C17RikJ3QP07 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
B020004C17RikJ3QP07 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.66■□□□□ 0.74
B020004C17RikJ3QP07 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
B020004C17RikJ3QP07 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
B020004C17RikJ3QP07 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.65■□□□□ 0.74
B020004C17RikJ3QP07 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.65■□□□□ 0.74
B020004C17RikJ3QP07 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
B020004C17RikJ3QP07 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
B020004C17RikJ3QP07 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC19.65■□□□□ 0.74
B020004C17RikJ3QP07 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
B020004C17RikJ3QP07 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
B020004C17RikJ3QP07 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
B020004C17RikJ3QP07 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
B020004C17RikJ3QP07 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
B020004C17RikJ3QP07 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
B020004C17RikJ3QP07 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
B020004C17RikJ3QP07 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
B020004C17RikJ3QP07 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
B020004C17RikJ3QP07 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
B020004C17RikJ3QP07 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
B020004C17RikJ3QP07 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
B020004C17RikJ3QP07 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
B020004C17RikJ3QP07 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
B020004C17RikJ3QP07 Ighv6-1-201ENSMUST00000193612 343 ntBASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms