Protein–RNA interactions for Protein: E9Q8Q6

Ccdc141, Coiled-coil domain-containing 141, mousemouse

Predictions only

Length 1,531 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc141E9Q8Q6 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Ccdc141E9Q8Q6 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
Ccdc141E9Q8Q6 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Ccdc141E9Q8Q6 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Ccdc141E9Q8Q6 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Ccdc141E9Q8Q6 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC26.53■■□□□ 1.84
Ccdc141E9Q8Q6 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Ccdc141E9Q8Q6 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Ccdc141E9Q8Q6 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC26.52■■□□□ 1.84
Ccdc141E9Q8Q6 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC26.52■■□□□ 1.84
Ccdc141E9Q8Q6 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC26.52■■□□□ 1.84
Ccdc141E9Q8Q6 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
Ccdc141E9Q8Q6 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
Ccdc141E9Q8Q6 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Ccdc141E9Q8Q6 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC26.52■■□□□ 1.84
Ccdc141E9Q8Q6 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC26.52■■□□□ 1.84
Ccdc141E9Q8Q6 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC26.52■■□□□ 1.84
Ccdc141E9Q8Q6 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC26.52■■□□□ 1.84
Ccdc141E9Q8Q6 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Ccdc141E9Q8Q6 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Ccdc141E9Q8Q6 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Ccdc141E9Q8Q6 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Ccdc141E9Q8Q6 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC26.52■■□□□ 1.84
Ccdc141E9Q8Q6 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC26.52■■□□□ 1.84
Ccdc141E9Q8Q6 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.84
Ccdc141E9Q8Q6 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Ccdc141E9Q8Q6 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC26.51■■□□□ 1.83
Ccdc141E9Q8Q6 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC26.51■■□□□ 1.83
Ccdc141E9Q8Q6 AC122351.1-201ENSMUST00000220467 126 ntBASIC26.51■■□□□ 1.83
Ccdc141E9Q8Q6 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC26.51■■□□□ 1.83
Ccdc141E9Q8Q6 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC26.51■■□□□ 1.83
Ccdc141E9Q8Q6 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC26.5■■□□□ 1.83
Ccdc141E9Q8Q6 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Ccdc141E9Q8Q6 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Ccdc141E9Q8Q6 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Ccdc141E9Q8Q6 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
Ccdc141E9Q8Q6 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC26.49■■□□□ 1.83
Ccdc141E9Q8Q6 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC26.49■■□□□ 1.83
Ccdc141E9Q8Q6 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC26.49■■□□□ 1.83
Ccdc141E9Q8Q6 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC26.49■■□□□ 1.83
Ccdc141E9Q8Q6 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC26.49■■□□□ 1.83
Ccdc141E9Q8Q6 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Ccdc141E9Q8Q6 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC26.49■■□□□ 1.83
Ccdc141E9Q8Q6 Notumos-201ENSMUST00000151998 2659 ntBASIC26.49■■□□□ 1.83
Ccdc141E9Q8Q6 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Ccdc141E9Q8Q6 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC26.49■■□□□ 1.83
Ccdc141E9Q8Q6 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
Ccdc141E9Q8Q6 Gm5784-201ENSMUST00000179344 2478 ntBASIC26.48■■□□□ 1.83
Ccdc141E9Q8Q6 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC26.48■■□□□ 1.83
Ccdc141E9Q8Q6 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Ccdc141E9Q8Q6 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Ccdc141E9Q8Q6 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC26.48■■□□□ 1.83
Ccdc141E9Q8Q6 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC26.48■■□□□ 1.83
Ccdc141E9Q8Q6 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC26.48■■□□□ 1.83
Ccdc141E9Q8Q6 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Ccdc141E9Q8Q6 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Ccdc141E9Q8Q6 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC26.48■■□□□ 1.83
Ccdc141E9Q8Q6 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Ccdc141E9Q8Q6 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC26.47■■□□□ 1.83
Ccdc141E9Q8Q6 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Ccdc141E9Q8Q6 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
Ccdc141E9Q8Q6 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Ccdc141E9Q8Q6 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC26.47■■□□□ 1.83
Ccdc141E9Q8Q6 AC125350.1-201ENSMUST00000225115 903 ntBASIC26.47■■□□□ 1.83
Ccdc141E9Q8Q6 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC26.47■■□□□ 1.83
Ccdc141E9Q8Q6 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
Ccdc141E9Q8Q6 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Ccdc141E9Q8Q6 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Ccdc141E9Q8Q6 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC26.46■■□□□ 1.83
Ccdc141E9Q8Q6 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Ccdc141E9Q8Q6 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC26.46■■□□□ 1.83
Ccdc141E9Q8Q6 Gm6443-201ENSMUST00000203599 874 ntBASIC26.46■■□□□ 1.83
Ccdc141E9Q8Q6 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Ccdc141E9Q8Q6 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Ccdc141E9Q8Q6 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Ccdc141E9Q8Q6 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Ccdc141E9Q8Q6 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC26.46■■□□□ 1.83
Ccdc141E9Q8Q6 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC26.46■■□□□ 1.83
Ccdc141E9Q8Q6 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Ccdc141E9Q8Q6 AC153889.1-201ENSMUST00000219257 330 ntBASIC26.45■■□□□ 1.83
Ccdc141E9Q8Q6 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
Ccdc141E9Q8Q6 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Ccdc141E9Q8Q6 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC26.44■■□□□ 1.82
Ccdc141E9Q8Q6 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC26.44■■□□□ 1.82
Ccdc141E9Q8Q6 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Ccdc141E9Q8Q6 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Ccdc141E9Q8Q6 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Ccdc141E9Q8Q6 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC26.44■■□□□ 1.82
Ccdc141E9Q8Q6 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC26.44■■□□□ 1.82
Ccdc141E9Q8Q6 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC26.44■■□□□ 1.82
Ccdc141E9Q8Q6 Gm12895-201ENSMUST00000122214 226 ntBASIC26.44■■□□□ 1.82
Ccdc141E9Q8Q6 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Ccdc141E9Q8Q6 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC26.44■■□□□ 1.82
Ccdc141E9Q8Q6 Gm43347-201ENSMUST00000200226 580 ntBASIC26.44■■□□□ 1.82
Ccdc141E9Q8Q6 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC26.44■■□□□ 1.82
Ccdc141E9Q8Q6 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Ccdc141E9Q8Q6 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC26.43■■□□□ 1.82
Ccdc141E9Q8Q6 Gm5864-201ENSMUST00000202263 970 ntBASIC26.43■■□□□ 1.82
Ccdc141E9Q8Q6 Gm43545-201ENSMUST00000196765 2779 ntBASIC26.42■■□□□ 1.82
Ccdc141E9Q8Q6 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC26.42■■□□□ 1.82
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms