Protein–RNA interactions for Protein: E9Q236

Abcc4, ATP-binding cassette, sub-family C (CFTR/MRP), member 4, mousemouse

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcc4E9Q236 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Abcc4E9Q236 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Abcc4E9Q236 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Abcc4E9Q236 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Abcc4E9Q236 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Abcc4E9Q236 Gm38027-201ENSMUST00000192315 235 ntBASIC21.34■■□□□ 1.01
Abcc4E9Q236 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Abcc4E9Q236 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Abcc4E9Q236 Fcho2-208ENSMUST00000224992 2964 ntBASIC21.34■■□□□ 1.01
Abcc4E9Q236 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Abcc4E9Q236 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Abcc4E9Q236 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Abcc4E9Q236 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Abcc4E9Q236 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1.01
Abcc4E9Q236 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Abcc4E9Q236 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC21.33■■□□□ 1.01
Abcc4E9Q236 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Abcc4E9Q236 Gm12085-201ENSMUST00000119263 940 ntBASIC21.33■■□□□ 1.01
Abcc4E9Q236 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC21.33■■□□□ 1.01
Abcc4E9Q236 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Abcc4E9Q236 Rarb-207ENSMUST00000225921 2756 ntBASIC21.33■■□□□ 1.01
Abcc4E9Q236 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Abcc4E9Q236 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC21.33■■□□□ 1.01
Abcc4E9Q236 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Abcc4E9Q236 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Abcc4E9Q236 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Abcc4E9Q236 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC21.32■■□□□ 1
Abcc4E9Q236 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Abcc4E9Q236 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC21.32■■□□□ 1
Abcc4E9Q236 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC21.32■■□□□ 1
Abcc4E9Q236 Gm19721-201ENSMUST00000195284 1764 ntBASIC21.32■■□□□ 1
Abcc4E9Q236 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Abcc4E9Q236 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC21.32■■□□□ 1
Abcc4E9Q236 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Abcc4E9Q236 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC21.32■■□□□ 1
Abcc4E9Q236 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Abcc4E9Q236 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Abcc4E9Q236 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Abcc4E9Q236 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC21.31■■□□□ 1
Abcc4E9Q236 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC21.31■■□□□ 1
Abcc4E9Q236 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC21.31■■□□□ 1
Abcc4E9Q236 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Abcc4E9Q236 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Abcc4E9Q236 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC21.31■■□□□ 1
Abcc4E9Q236 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC21.31■■□□□ 1
Abcc4E9Q236 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Abcc4E9Q236 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Abcc4E9Q236 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Abcc4E9Q236 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC21.3■■□□□ 1
Abcc4E9Q236 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC21.3■■□□□ 1
Abcc4E9Q236 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Abcc4E9Q236 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Abcc4E9Q236 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC21.3■■□□□ 1
Abcc4E9Q236 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC21.3■■□□□ 1
Abcc4E9Q236 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC21.3■■□□□ 1
Abcc4E9Q236 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC21.3■■□□□ 1
Abcc4E9Q236 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC21.3■■□□□ 1
Abcc4E9Q236 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC21.3■■□□□ 1
Abcc4E9Q236 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC21.3■■□□□ 1
Abcc4E9Q236 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC21.3■■□□□ 1
Abcc4E9Q236 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Abcc4E9Q236 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC21.3■■□□□ 1
Abcc4E9Q236 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Abcc4E9Q236 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Abcc4E9Q236 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC21.29■■□□□ 1
Abcc4E9Q236 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
Abcc4E9Q236 Gm5417-201ENSMUST00000079706 384 ntBASIC21.29■■□□□ 1
Abcc4E9Q236 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Abcc4E9Q236 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC21.29■■□□□ 1
Abcc4E9Q236 AC125311.2-201ENSMUST00000227477 1940 ntBASIC21.29■■□□□ 1
Abcc4E9Q236 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Abcc4E9Q236 Gm44832-201ENSMUST00000208849 2303 ntBASIC21.29■■□□□ 1
Abcc4E9Q236 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Abcc4E9Q236 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Abcc4E9Q236 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Abcc4E9Q236 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Abcc4E9Q236 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Abcc4E9Q236 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Abcc4E9Q236 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Abcc4E9Q236 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC21.28■■□□□ 1
Abcc4E9Q236 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC21.28■■□□□ 1
Abcc4E9Q236 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC21.28■■□□□ 1
Abcc4E9Q236 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC21.28■■□□□ 1
Abcc4E9Q236 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Abcc4E9Q236 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC21.28■■□□□ 1
Abcc4E9Q236 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC21.28■■□□□ 1
Abcc4E9Q236 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC21.28■■□□□ 1
Abcc4E9Q236 Gm20472-201ENSMUST00000174403 1240 ntBASIC21.28■■□□□ 1
Abcc4E9Q236 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC21.28■■□□□ 1
Abcc4E9Q236 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC21.28■■□□□ 1
Abcc4E9Q236 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Abcc4E9Q236 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC21.27■■□□□ 1
Abcc4E9Q236 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC21.27■■□□□ 1
Abcc4E9Q236 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC21.27■■□□□ 1
Abcc4E9Q236 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Abcc4E9Q236 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
Abcc4E9Q236 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Abcc4E9Q236 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC21.27■■□□□ 1
Abcc4E9Q236 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Abcc4E9Q236 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms