Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm28043E0CXC2 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm28043E0CXC2 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm28043E0CXC2 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Gm28043E0CXC2 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm28043E0CXC2 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm28043E0CXC2 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm28043E0CXC2 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm28043E0CXC2 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
Gm28043E0CXC2 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm28043E0CXC2 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm28043E0CXC2 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Gm28043E0CXC2 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Gm28043E0CXC2 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm28043E0CXC2 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm28043E0CXC2 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm28043E0CXC2 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm28043E0CXC2 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm28043E0CXC2 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm28043E0CXC2 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Gm28043E0CXC2 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Gm28043E0CXC2 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
Gm28043E0CXC2 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm28043E0CXC2 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.64■□□□□ 0.42
Gm28043E0CXC2 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Gm28043E0CXC2 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Gm28043E0CXC2 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.64■□□□□ 0.41
Gm28043E0CXC2 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Gm28043E0CXC2 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm28043E0CXC2 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Gm28043E0CXC2 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm28043E0CXC2 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Gm28043E0CXC2 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm28043E0CXC2 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm28043E0CXC2 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm28043E0CXC2 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm28043E0CXC2 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm28043E0CXC2 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm28043E0CXC2 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Gm28043E0CXC2 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm28043E0CXC2 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm28043E0CXC2 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Gm28043E0CXC2 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm28043E0CXC2 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Gm28043E0CXC2 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.64■□□□□ 0.41
Gm28043E0CXC2 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm28043E0CXC2 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm28043E0CXC2 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.63■□□□□ 0.41
Gm28043E0CXC2 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Gm28043E0CXC2 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm28043E0CXC2 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm28043E0CXC2 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm28043E0CXC2 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.63■□□□□ 0.41
Gm28043E0CXC2 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm28043E0CXC2 Gm6211-202ENSMUST00000167849 925 ntBASIC17.63■□□□□ 0.41
Gm28043E0CXC2 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm28043E0CXC2 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm28043E0CXC2 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm28043E0CXC2 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm28043E0CXC2 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm28043E0CXC2 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
Gm28043E0CXC2 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Gm28043E0CXC2 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Gm28043E0CXC2 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm28043E0CXC2 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Gm28043E0CXC2 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm28043E0CXC2 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm28043E0CXC2 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm28043E0CXC2 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
Gm28043E0CXC2 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.62■□□□□ 0.41
Gm28043E0CXC2 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Gm28043E0CXC2 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Gm28043E0CXC2 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.62■□□□□ 0.41
Gm28043E0CXC2 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm28043E0CXC2 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm28043E0CXC2 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Gm28043E0CXC2 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Gm28043E0CXC2 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Gm28043E0CXC2 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.62■□□□□ 0.41
Gm28043E0CXC2 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm28043E0CXC2 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm28043E0CXC2 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm28043E0CXC2 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.62■□□□□ 0.41
Gm28043E0CXC2 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm28043E0CXC2 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Gm28043E0CXC2 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm28043E0CXC2 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Gm28043E0CXC2 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm28043E0CXC2 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Gm28043E0CXC2 Mir5133-201ENSMUST00000174955 77 ntBASIC17.61■□□□□ 0.41
Gm28043E0CXC2 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.61■□□□□ 0.41
Gm28043E0CXC2 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.61■□□□□ 0.41
Gm28043E0CXC2 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm28043E0CXC2 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm28043E0CXC2 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm28043E0CXC2 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm28043E0CXC2 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm28043E0CXC2 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm28043E0CXC2 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm28043E0CXC2 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms