Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Hfm1D3Z4R1 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC24.76■■□□□ 1.55
Hfm1D3Z4R1 AC122351.1-201ENSMUST00000220467 126 ntBASIC24.76■■□□□ 1.55
Hfm1D3Z4R1 Gm43213-201ENSMUST00000151866 1790 ntBASIC24.76■■□□□ 1.55
Hfm1D3Z4R1 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Hfm1D3Z4R1 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Hfm1D3Z4R1 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Hfm1D3Z4R1 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC24.75■■□□□ 1.55
Hfm1D3Z4R1 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC24.75■■□□□ 1.55
Hfm1D3Z4R1 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC24.75■■□□□ 1.55
Hfm1D3Z4R1 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC24.75■■□□□ 1.55
Hfm1D3Z4R1 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Hfm1D3Z4R1 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC24.75■■□□□ 1.55
Hfm1D3Z4R1 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC24.74■■□□□ 1.55
Hfm1D3Z4R1 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Hfm1D3Z4R1 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
Hfm1D3Z4R1 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Hfm1D3Z4R1 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Hfm1D3Z4R1 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Hfm1D3Z4R1 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC24.74■■□□□ 1.55
Hfm1D3Z4R1 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Hfm1D3Z4R1 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Hfm1D3Z4R1 Gm5864-201ENSMUST00000202263 970 ntBASIC24.74■■□□□ 1.55
Hfm1D3Z4R1 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC24.74■■□□□ 1.55
Hfm1D3Z4R1 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC24.74■■□□□ 1.55
Hfm1D3Z4R1 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC24.74■■□□□ 1.55
Hfm1D3Z4R1 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC24.73■■□□□ 1.55
Hfm1D3Z4R1 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC24.73■■□□□ 1.55
Hfm1D3Z4R1 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC24.73■■□□□ 1.55
Hfm1D3Z4R1 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC24.73■■□□□ 1.55
Hfm1D3Z4R1 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC24.73■■□□□ 1.55
Hfm1D3Z4R1 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC24.73■■□□□ 1.55
Hfm1D3Z4R1 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC24.73■■□□□ 1.55
Hfm1D3Z4R1 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC24.73■■□□□ 1.55
Hfm1D3Z4R1 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC24.73■■□□□ 1.55
Hfm1D3Z4R1 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Hfm1D3Z4R1 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Hfm1D3Z4R1 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Hfm1D3Z4R1 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Hfm1D3Z4R1 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC24.72■■□□□ 1.55
Hfm1D3Z4R1 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Hfm1D3Z4R1 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC24.72■■□□□ 1.55
Hfm1D3Z4R1 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC24.72■■□□□ 1.55
Hfm1D3Z4R1 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Hfm1D3Z4R1 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC24.72■■□□□ 1.55
Hfm1D3Z4R1 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Hfm1D3Z4R1 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Hfm1D3Z4R1 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Hfm1D3Z4R1 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Hfm1D3Z4R1 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Hfm1D3Z4R1 Gm12895-201ENSMUST00000122214 226 ntBASIC24.71■■□□□ 1.55
Hfm1D3Z4R1 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Hfm1D3Z4R1 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC24.71■■□□□ 1.55
Hfm1D3Z4R1 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC24.71■■□□□ 1.55
Hfm1D3Z4R1 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC24.71■■□□□ 1.55
Hfm1D3Z4R1 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Hfm1D3Z4R1 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
Hfm1D3Z4R1 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Hfm1D3Z4R1 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC24.71■■□□□ 1.55
Hfm1D3Z4R1 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC24.7■■□□□ 1.55
Hfm1D3Z4R1 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.55
Hfm1D3Z4R1 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC24.7■■□□□ 1.55
Hfm1D3Z4R1 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Hfm1D3Z4R1 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC24.7■■□□□ 1.54
Hfm1D3Z4R1 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC24.7■■□□□ 1.54
Hfm1D3Z4R1 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Hfm1D3Z4R1 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
Hfm1D3Z4R1 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC24.69■■□□□ 1.54
Hfm1D3Z4R1 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC24.69■■□□□ 1.54
Hfm1D3Z4R1 Gm43347-201ENSMUST00000200226 580 ntBASIC24.69■■□□□ 1.54
Hfm1D3Z4R1 AC153889.1-201ENSMUST00000219257 330 ntBASIC24.69■■□□□ 1.54
Hfm1D3Z4R1 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Hfm1D3Z4R1 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
Hfm1D3Z4R1 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Hfm1D3Z4R1 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Hfm1D3Z4R1 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC24.69■■□□□ 1.54
Hfm1D3Z4R1 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Hfm1D3Z4R1 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Hfm1D3Z4R1 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
Hfm1D3Z4R1 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Hfm1D3Z4R1 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Hfm1D3Z4R1 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Hfm1D3Z4R1 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC24.68■■□□□ 1.54
Hfm1D3Z4R1 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC24.68■■□□□ 1.54
Hfm1D3Z4R1 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Hfm1D3Z4R1 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC24.68■■□□□ 1.54
Hfm1D3Z4R1 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC24.68■■□□□ 1.54
Hfm1D3Z4R1 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC24.68■■□□□ 1.54
Hfm1D3Z4R1 Mir8112-201ENSMUST00000184382 131 ntBASIC24.68■■□□□ 1.54
Hfm1D3Z4R1 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC24.68■■□□□ 1.54
Hfm1D3Z4R1 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Hfm1D3Z4R1 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC24.67■■□□□ 1.54
Hfm1D3Z4R1 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
Hfm1D3Z4R1 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Hfm1D3Z4R1 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
Hfm1D3Z4R1 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Hfm1D3Z4R1 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
Hfm1D3Z4R1 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC24.67■■□□□ 1.54
Hfm1D3Z4R1 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
Hfm1D3Z4R1 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms