Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Iqck-206ENSMUST00000208658 2891 ntBASIC15.73■□□□□ 0.11
Shank1D3YZU1 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Shank1D3YZU1 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Shank1D3YZU1 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Shank1D3YZU1 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Shank1D3YZU1 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Shank1D3YZU1 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Shank1D3YZU1 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Shank1D3YZU1 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Shank1D3YZU1 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Shank1D3YZU1 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Shank1D3YZU1 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Shank1D3YZU1 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Shank1D3YZU1 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Shank1D3YZU1 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Shank1D3YZU1 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC15.72■□□□□ 0.11
Shank1D3YZU1 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Shank1D3YZU1 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Shank1D3YZU1 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Shank1D3YZU1 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Shank1D3YZU1 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC15.71■□□□□ 0.11
Shank1D3YZU1 Mzt1-203ENSMUST00000227948 952 ntBASIC15.71■□□□□ 0.11
Shank1D3YZU1 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Shank1D3YZU1 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Shank1D3YZU1 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Shank1D3YZU1 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Shank1D3YZU1 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Shank1D3YZU1 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Shank1D3YZU1 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Shank1D3YZU1 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Shank1D3YZU1 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shank1D3YZU1 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC15.7■□□□□ 0.1
Shank1D3YZU1 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shank1D3YZU1 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shank1D3YZU1 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shank1D3YZU1 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shank1D3YZU1 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC15.7■□□□□ 0.1
Shank1D3YZU1 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shank1D3YZU1 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Shank1D3YZU1 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shank1D3YZU1 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC15.7■□□□□ 0.1
Shank1D3YZU1 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
Shank1D3YZU1 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shank1D3YZU1 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shank1D3YZU1 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Shank1D3YZU1 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shank1D3YZU1 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shank1D3YZU1 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Shank1D3YZU1 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shank1D3YZU1 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shank1D3YZU1 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shank1D3YZU1 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shank1D3YZU1 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shank1D3YZU1 Gm25925-201ENSMUST00000158314 306 ntBASIC15.69■□□□□ 0.1
Shank1D3YZU1 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC15.69■□□□□ 0.1
Shank1D3YZU1 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shank1D3YZU1 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shank1D3YZU1 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC15.69■□□□□ 0.1
Shank1D3YZU1 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC15.69■□□□□ 0.1
Shank1D3YZU1 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC15.69■□□□□ 0.1
Shank1D3YZU1 Gm27357-201ENSMUST00000183754 135 ntBASIC15.69■□□□□ 0.1
Shank1D3YZU1 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Shank1D3YZU1 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shank1D3YZU1 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shank1D3YZU1 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Shank1D3YZU1 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Shank1D3YZU1 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC15.68■□□□□ 0.1
Shank1D3YZU1 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Shank1D3YZU1 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Shank1D3YZU1 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shank1D3YZU1 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC15.68■□□□□ 0.1
Shank1D3YZU1 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shank1D3YZU1 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shank1D3YZU1 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Shank1D3YZU1 Gm27389-201ENSMUST00000183622 195 ntBASIC15.68■□□□□ 0.1
Shank1D3YZU1 Gm34391-201ENSMUST00000203706 907 ntBASIC15.68■□□□□ 0.1
Shank1D3YZU1 Otx2os1-206ENSMUST00000228153 787 ntBASIC15.68■□□□□ 0.1
Shank1D3YZU1 Gm5867-201ENSMUST00000063197 592 ntBASIC15.68■□□□□ 0.1
Shank1D3YZU1 Rncr4-201ENSMUST00000194541 2234 ntBASIC15.67■□□□□ 0.1
Shank1D3YZU1 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Shank1D3YZU1 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Shank1D3YZU1 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Shank1D3YZU1 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Shank1D3YZU1 Gm9694-201ENSMUST00000193347 1189 ntBASIC15.67■□□□□ 0.1
Shank1D3YZU1 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Shank1D3YZU1 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Shank1D3YZU1 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Shank1D3YZU1 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Shank1D3YZU1 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Shank1D3YZU1 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC15.66■□□□□ 0.1
Shank1D3YZU1 Gm18115-201ENSMUST00000221209 621 ntBASIC15.66■□□□□ 0.1
Shank1D3YZU1 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Shank1D3YZU1 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC15.66■□□□□ 0.1
Shank1D3YZU1 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Shank1D3YZU1 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Shank1D3YZU1 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Shank1D3YZU1 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Shank1D3YZU1 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Shank1D3YZU1 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Shank1D3YZU1 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms