Protein–RNA interactions for Protein: D3YUM8

Gm4950, Proteasome subunit beta type, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4950D3YUM8 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
Gm4950D3YUM8 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Gm4950D3YUM8 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC15.09■□□□□ 0.01
Gm4950D3YUM8 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC15.09■□□□□ 0.01
Gm4950D3YUM8 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm4950D3YUM8 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Gm4950D3YUM8 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC15.09■□□□□ 0.01
Gm4950D3YUM8 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm4950D3YUM8 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm4950D3YUM8 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm4950D3YUM8 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm4950D3YUM8 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm4950D3YUM8 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Gm4950D3YUM8 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Gm4950D3YUM8 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm4950D3YUM8 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Gm4950D3YUM8 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Gm4950D3YUM8 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Gm4950D3YUM8 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm4950D3YUM8 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Gm4950D3YUM8 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Gm4950D3YUM8 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Gm4950D3YUM8 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Gm4950D3YUM8 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC15.08■□□□□ 0
Gm4950D3YUM8 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Gm4950D3YUM8 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Gm4950D3YUM8 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Gm4950D3YUM8 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC15.08■□□□□ 0
Gm4950D3YUM8 Gm13148-201ENSMUST00000118892 745 ntBASIC15.08■□□□□ 0
Gm4950D3YUM8 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC15.08■□□□□ 0
Gm4950D3YUM8 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC15.08■□□□□ 0
Gm4950D3YUM8 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC15.08■□□□□ 0
Gm4950D3YUM8 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC15.08■□□□□ 0
Gm4950D3YUM8 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Gm4950D3YUM8 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Gm4950D3YUM8 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Gm4950D3YUM8 Gm37374-201ENSMUST00000194954 1829 ntBASIC15.08■□□□□ 0
Gm4950D3YUM8 Gm44544-201ENSMUST00000207052 1844 ntBASIC15.08■□□□□ 0
Gm4950D3YUM8 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC15.08■□□□□ 0
Gm4950D3YUM8 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC15.08■□□□□ 0
Gm4950D3YUM8 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Gm4950D3YUM8 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Gm4950D3YUM8 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Gm4950D3YUM8 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Gm4950D3YUM8 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Gm4950D3YUM8 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Gm4950D3YUM8 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Gm4950D3YUM8 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Gm4950D3YUM8 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Gm4950D3YUM8 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Gm4950D3YUM8 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC15.07■□□□□ 0
Gm4950D3YUM8 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Gm4950D3YUM8 Gm26524-201ENSMUST00000192339 390 ntBASIC15.07■□□□□ 0
Gm4950D3YUM8 Gm37179-201ENSMUST00000194862 823 ntBASIC15.07■□□□□ 0
Gm4950D3YUM8 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC15.07■□□□□ 0
Gm4950D3YUM8 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Gm4950D3YUM8 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Gm4950D3YUM8 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Gm4950D3YUM8 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Gm4950D3YUM8 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Gm4950D3YUM8 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC15.07■□□□□ 0
Gm4950D3YUM8 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC15.06■□□□□ 0
Gm4950D3YUM8 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Gm4950D3YUM8 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Gm4950D3YUM8 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Gm4950D3YUM8 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC15.06■□□□□ 0
Gm4950D3YUM8 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC15.06■□□□□ 0
Gm4950D3YUM8 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Gm4950D3YUM8 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Gm4950D3YUM8 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC15.06■□□□□ 0
Gm4950D3YUM8 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Gm4950D3YUM8 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC15.05■□□□□ 0
Gm4950D3YUM8 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Gm4950D3YUM8 Gm2399-201ENSMUST00000104944 225 ntBASIC15.05■□□□□ -0
Gm4950D3YUM8 Gm12933-201ENSMUST00000120203 872 ntBASIC15.05■□□□□ -0
Gm4950D3YUM8 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Gm4950D3YUM8 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Gm4950D3YUM8 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC15.05■□□□□ -0
Gm4950D3YUM8 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Gm4950D3YUM8 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Gm4950D3YUM8 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Gm4950D3YUM8 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC15.05■□□□□ -0
Gm4950D3YUM8 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Gm4950D3YUM8 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Gm4950D3YUM8 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC15.05■□□□□ -0
Gm4950D3YUM8 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC15.05■□□□□ -0
Gm4950D3YUM8 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Gm4950D3YUM8 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Gm4950D3YUM8 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC15.05■□□□□ -0
Gm4950D3YUM8 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC15.05■□□□□ -0
Gm4950D3YUM8 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC15.05■□□□□ -0
Gm4950D3YUM8 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Gm4950D3YUM8 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC15.05■□□□□ -0
Gm4950D3YUM8 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Gm4950D3YUM8 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Gm4950D3YUM8 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Gm4950D3YUM8 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Gm4950D3YUM8 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Gm4950D3YUM8 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Gm4950D3YUM8 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms