Protein–RNA interactions for Protein: A3KG49

Gm5640, Predicted gene 5640, mousemouse

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5640A3KG49 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gm5640A3KG49 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gm5640A3KG49 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Gm5640A3KG49 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Gm5640A3KG49 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
Gm5640A3KG49 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gm5640A3KG49 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gm5640A3KG49 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gm5640A3KG49 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Gm5640A3KG49 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Gm5640A3KG49 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gm5640A3KG49 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gm5640A3KG49 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gm5640A3KG49 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.87■□□□□ 0.45
Gm5640A3KG49 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Gm5640A3KG49 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gm5640A3KG49 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gm5640A3KG49 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gm5640A3KG49 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Gm5640A3KG49 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gm5640A3KG49 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Gm5640A3KG49 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.87■□□□□ 0.45
Gm5640A3KG49 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.87■□□□□ 0.45
Gm5640A3KG49 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Gm5640A3KG49 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gm5640A3KG49 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gm5640A3KG49 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.87■□□□□ 0.45
Gm5640A3KG49 Gm43034-201ENSMUST00000198678 1364 ntBASIC17.87■□□□□ 0.45
Gm5640A3KG49 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.87■□□□□ 0.45
Gm5640A3KG49 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Gm5640A3KG49 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gm5640A3KG49 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.87■□□□□ 0.45
Gm5640A3KG49 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gm5640A3KG49 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.87■□□□□ 0.45
Gm5640A3KG49 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gm5640A3KG49 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.87■□□□□ 0.45
Gm5640A3KG49 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gm5640A3KG49 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gm5640A3KG49 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gm5640A3KG49 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Gm5640A3KG49 AC140930.3-201ENSMUST00000222935 274 ntBASIC17.86■□□□□ 0.45
Gm5640A3KG49 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gm5640A3KG49 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gm5640A3KG49 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gm5640A3KG49 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
Gm5640A3KG49 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gm5640A3KG49 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gm5640A3KG49 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gm5640A3KG49 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gm5640A3KG49 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gm5640A3KG49 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gm5640A3KG49 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Gm5640A3KG49 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gm5640A3KG49 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.85■□□□□ 0.45
Gm5640A3KG49 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Gm5640A3KG49 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.85■□□□□ 0.45
Gm5640A3KG49 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Gm5640A3KG49 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Gm5640A3KG49 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Gm5640A3KG49 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.85■□□□□ 0.45
Gm5640A3KG49 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Gm5640A3KG49 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Gm5640A3KG49 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Gm5640A3KG49 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.85■□□□□ 0.45
Gm5640A3KG49 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Gm5640A3KG49 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Gm5640A3KG49 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Gm5640A3KG49 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Gm5640A3KG49 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm5640A3KG49 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm5640A3KG49 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm5640A3KG49 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.84■□□□□ 0.45
Gm5640A3KG49 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.84■□□□□ 0.45
Gm5640A3KG49 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm5640A3KG49 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC17.84■□□□□ 0.45
Gm5640A3KG49 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm5640A3KG49 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm5640A3KG49 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Gm5640A3KG49 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm5640A3KG49 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Gm5640A3KG49 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Gm5640A3KG49 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Gm5640A3KG49 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm5640A3KG49 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.84■□□□□ 0.45
Gm5640A3KG49 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm5640A3KG49 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm5640A3KG49 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.84■□□□□ 0.45
Gm5640A3KG49 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm5640A3KG49 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Gm5640A3KG49 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Gm5640A3KG49 Gm22325-201ENSMUST00000158904 308 ntBASIC17.83■□□□□ 0.44
Gm5640A3KG49 Wdr70-203ENSMUST00000227371 1130 ntBASIC17.83■□□□□ 0.44
Gm5640A3KG49 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Gm5640A3KG49 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Gm5640A3KG49 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Gm5640A3KG49 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Gm5640A3KG49 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Gm5640A3KG49 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Gm5640A3KG49 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Gm5640A3KG49 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms