Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav13n-4A0A0G2JG01 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Trav13n-4A0A0G2JG01 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trav13n-4A0A0G2JG01 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC14.27□□□□□ -0.13
Trav13n-4A0A0G2JG01 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC14.27□□□□□ -0.13
Trav13n-4A0A0G2JG01 Gm6576-201ENSMUST00000169678 883 ntBASIC14.27□□□□□ -0.13
Trav13n-4A0A0G2JG01 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC14.27□□□□□ -0.13
Trav13n-4A0A0G2JG01 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav13n-4A0A0G2JG01 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav13n-4A0A0G2JG01 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav13n-4A0A0G2JG01 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav13n-4A0A0G2JG01 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC14.27□□□□□ -0.13
Trav13n-4A0A0G2JG01 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav13n-4A0A0G2JG01 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav13n-4A0A0G2JG01 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
Trav13n-4A0A0G2JG01 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav13n-4A0A0G2JG01 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13n-4A0A0G2JG01 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13n-4A0A0G2JG01 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13n-4A0A0G2JG01 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13n-4A0A0G2JG01 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Trav13n-4A0A0G2JG01 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13n-4A0A0G2JG01 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13n-4A0A0G2JG01 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13n-4A0A0G2JG01 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC14.26□□□□□ -0.13
Trav13n-4A0A0G2JG01 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC14.26□□□□□ -0.13
Trav13n-4A0A0G2JG01 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC14.26□□□□□ -0.13
Trav13n-4A0A0G2JG01 Gm37805-201ENSMUST00000192612 1094 ntBASIC14.26□□□□□ -0.13
Trav13n-4A0A0G2JG01 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC14.26□□□□□ -0.13
Trav13n-4A0A0G2JG01 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13n-4A0A0G2JG01 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13n-4A0A0G2JG01 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13n-4A0A0G2JG01 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13n-4A0A0G2JG01 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13n-4A0A0G2JG01 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Trav13n-4A0A0G2JG01 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13n-4A0A0G2JG01 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13n-4A0A0G2JG01 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Trav13n-4A0A0G2JG01 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trav13n-4A0A0G2JG01 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13n-4A0A0G2JG01 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13n-4A0A0G2JG01 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC14.25□□□□□ -0.13
Trav13n-4A0A0G2JG01 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13n-4A0A0G2JG01 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trav13n-4A0A0G2JG01 Gm9194-201ENSMUST00000220749 1447 ntBASIC14.25□□□□□ -0.13
Trav13n-4A0A0G2JG01 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trav13n-4A0A0G2JG01 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13n-4A0A0G2JG01 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trav13n-4A0A0G2JG01 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trav13n-4A0A0G2JG01 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13n-4A0A0G2JG01 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13n-4A0A0G2JG01 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13n-4A0A0G2JG01 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13n-4A0A0G2JG01 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13n-4A0A0G2JG01 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13n-4A0A0G2JG01 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13n-4A0A0G2JG01 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13n-4A0A0G2JG01 Gm29241-201ENSMUST00000189260 1096 ntBASIC14.25□□□□□ -0.13
Trav13n-4A0A0G2JG01 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC14.25□□□□□ -0.13
Trav13n-4A0A0G2JG01 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trav13n-4A0A0G2JG01 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC14.25□□□□□ -0.13
Trav13n-4A0A0G2JG01 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trav13n-4A0A0G2JG01 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Trav13n-4A0A0G2JG01 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13n-4A0A0G2JG01 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trav13n-4A0A0G2JG01 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13n-4A0A0G2JG01 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13n-4A0A0G2JG01 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13n-4A0A0G2JG01 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13n-4A0A0G2JG01 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13n-4A0A0G2JG01 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13n-4A0A0G2JG01 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13n-4A0A0G2JG01 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13n-4A0A0G2JG01 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav13n-4A0A0G2JG01 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav13n-4A0A0G2JG01 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav13n-4A0A0G2JG01 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav13n-4A0A0G2JG01 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav13n-4A0A0G2JG01 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav13n-4A0A0G2JG01 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC14.24□□□□□ -0.13
Trav13n-4A0A0G2JG01 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav13n-4A0A0G2JG01 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav13n-4A0A0G2JG01 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav13n-4A0A0G2JG01 Fcho2-208ENSMUST00000224992 2964 ntBASIC14.24□□□□□ -0.13
Trav13n-4A0A0G2JG01 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav13n-4A0A0G2JG01 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav13n-4A0A0G2JG01 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav13n-4A0A0G2JG01 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav13n-4A0A0G2JG01 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav13n-4A0A0G2JG01 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav13n-4A0A0G2JG01 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav13n-4A0A0G2JG01 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav13n-4A0A0G2JG01 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav13n-4A0A0G2JG01 Gm5643-201ENSMUST00000117081 966 ntBASIC14.23□□□□□ -0.13
Trav13n-4A0A0G2JG01 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Trav13n-4A0A0G2JG01 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC14.23□□□□□ -0.13
Trav13n-4A0A0G2JG01 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC14.23□□□□□ -0.13
Trav13n-4A0A0G2JG01 AC107452.1-201ENSMUST00000227963 481 ntBASIC14.23□□□□□ -0.13
Trav13n-4A0A0G2JG01 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav13n-4A0A0G2JG01 AC121961.1-201ENSMUST00000218594 1779 ntBASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms