Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav9-4A0A0B4J1K2 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC13.21□□□□□ -0.29
Trav9-4A0A0B4J1K2 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav9-4A0A0B4J1K2 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav9-4A0A0B4J1K2 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav9-4A0A0B4J1K2 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Trav9-4A0A0B4J1K2 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav9-4A0A0B4J1K2 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC13.21□□□□□ -0.29
Trav9-4A0A0B4J1K2 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC13.21□□□□□ -0.29
Trav9-4A0A0B4J1K2 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav9-4A0A0B4J1K2 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav9-4A0A0B4J1K2 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav9-4A0A0B4J1K2 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav9-4A0A0B4J1K2 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Trav9-4A0A0B4J1K2 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav9-4A0A0B4J1K2 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav9-4A0A0B4J1K2 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav9-4A0A0B4J1K2 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav9-4A0A0B4J1K2 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trav9-4A0A0B4J1K2 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav9-4A0A0B4J1K2 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav9-4A0A0B4J1K2 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav9-4A0A0B4J1K2 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav9-4A0A0B4J1K2 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav9-4A0A0B4J1K2 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Trav9-4A0A0B4J1K2 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav9-4A0A0B4J1K2 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav9-4A0A0B4J1K2 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav9-4A0A0B4J1K2 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav9-4A0A0B4J1K2 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC13.2□□□□□ -0.3
Trav9-4A0A0B4J1K2 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav9-4A0A0B4J1K2 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav9-4A0A0B4J1K2 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav9-4A0A0B4J1K2 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Trav9-4A0A0B4J1K2 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav9-4A0A0B4J1K2 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav9-4A0A0B4J1K2 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav9-4A0A0B4J1K2 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC13.2□□□□□ -0.3
Trav9-4A0A0B4J1K2 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav9-4A0A0B4J1K2 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav9-4A0A0B4J1K2 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC13.2□□□□□ -0.3
Trav9-4A0A0B4J1K2 Gm5643-201ENSMUST00000117081 966 ntBASIC13.2□□□□□ -0.3
Trav9-4A0A0B4J1K2 Mir6349-201ENSMUST00000184059 97 ntBASIC13.2□□□□□ -0.3
Trav9-4A0A0B4J1K2 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC13.2□□□□□ -0.3
Trav9-4A0A0B4J1K2 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav9-4A0A0B4J1K2 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav9-4A0A0B4J1K2 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Trav9-4A0A0B4J1K2 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav9-4A0A0B4J1K2 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav9-4A0A0B4J1K2 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC13.2□□□□□ -0.3
Trav9-4A0A0B4J1K2 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC13.2□□□□□ -0.3
Trav9-4A0A0B4J1K2 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav9-4A0A0B4J1K2 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Trav9-4A0A0B4J1K2 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Trav9-4A0A0B4J1K2 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav9-4A0A0B4J1K2 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC13.2□□□□□ -0.3
Trav9-4A0A0B4J1K2 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav9-4A0A0B4J1K2 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav9-4A0A0B4J1K2 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav9-4A0A0B4J1K2 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav9-4A0A0B4J1K2 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9-4A0A0B4J1K2 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9-4A0A0B4J1K2 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9-4A0A0B4J1K2 Idnk-204ENSMUST00000226010 1898 ntBASIC13.19□□□□□ -0.3
Trav9-4A0A0B4J1K2 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC13.19□□□□□ -0.3
Trav9-4A0A0B4J1K2 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9-4A0A0B4J1K2 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9-4A0A0B4J1K2 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9-4A0A0B4J1K2 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9-4A0A0B4J1K2 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC13.19□□□□□ -0.3
Trav9-4A0A0B4J1K2 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC13.19□□□□□ -0.3
Trav9-4A0A0B4J1K2 H2-K2-201ENSMUST00000174250 1049 ntBASIC13.19□□□□□ -0.3
Trav9-4A0A0B4J1K2 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9-4A0A0B4J1K2 Gm8520-201ENSMUST00000186517 868 ntBASIC13.19□□□□□ -0.3
Trav9-4A0A0B4J1K2 Gm42545-201ENSMUST00000202755 922 ntBASIC13.19□□□□□ -0.3
Trav9-4A0A0B4J1K2 Gm29791-202ENSMUST00000207888 369 ntBASIC13.19□□□□□ -0.3
Trav9-4A0A0B4J1K2 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9-4A0A0B4J1K2 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9-4A0A0B4J1K2 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9-4A0A0B4J1K2 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trav9-4A0A0B4J1K2 Gm10654-201ENSMUST00000098653 1633 ntBASIC13.19□□□□□ -0.3
Trav9-4A0A0B4J1K2 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9-4A0A0B4J1K2 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9-4A0A0B4J1K2 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9-4A0A0B4J1K2 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9-4A0A0B4J1K2 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9-4A0A0B4J1K2 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9-4A0A0B4J1K2 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9-4A0A0B4J1K2 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9-4A0A0B4J1K2 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9-4A0A0B4J1K2 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Trav9-4A0A0B4J1K2 Gm18025-201ENSMUST00000221733 862 ntBASIC13.18□□□□□ -0.3
Trav9-4A0A0B4J1K2 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9-4A0A0B4J1K2 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9-4A0A0B4J1K2 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9-4A0A0B4J1K2 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9-4A0A0B4J1K2 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trav9-4A0A0B4J1K2 Gm43182-201ENSMUST00000199476 2528 ntBASIC13.18□□□□□ -0.3
Trav9-4A0A0B4J1K2 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC13.18□□□□□ -0.3
Trav9-4A0A0B4J1K2 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms