Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv3A0A0A6YYE2 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv3A0A0A6YYE2 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv3A0A0A6YYE2 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv3A0A0A6YYE2 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv3A0A0A6YYE2 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv3A0A0A6YYE2 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC13.59□□□□□ -0.23
Trbv3A0A0A6YYE2 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trbv3A0A0A6YYE2 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Trbv3A0A0A6YYE2 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv3A0A0A6YYE2 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trbv3A0A0A6YYE2 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC13.58□□□□□ -0.23
Trbv3A0A0A6YYE2 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trbv3A0A0A6YYE2 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trbv3A0A0A6YYE2 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trbv3A0A0A6YYE2 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trbv3A0A0A6YYE2 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trbv3A0A0A6YYE2 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trbv3A0A0A6YYE2 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trbv3A0A0A6YYE2 Hivep3-201ENSMUST00000084306 2973 ntBASIC13.58□□□□□ -0.24
Trbv3A0A0A6YYE2 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trbv3A0A0A6YYE2 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trbv3A0A0A6YYE2 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trbv3A0A0A6YYE2 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
Trbv3A0A0A6YYE2 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trbv3A0A0A6YYE2 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC13.58□□□□□ -0.24
Trbv3A0A0A6YYE2 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
Trbv3A0A0A6YYE2 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trbv3A0A0A6YYE2 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trbv3A0A0A6YYE2 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trbv3A0A0A6YYE2 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trbv3A0A0A6YYE2 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trbv3A0A0A6YYE2 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC13.58□□□□□ -0.24
Trbv3A0A0A6YYE2 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trbv3A0A0A6YYE2 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trbv3A0A0A6YYE2 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trbv3A0A0A6YYE2 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trbv3A0A0A6YYE2 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trbv3A0A0A6YYE2 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trbv3A0A0A6YYE2 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Trbv3A0A0A6YYE2 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trbv3A0A0A6YYE2 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Trbv3A0A0A6YYE2 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Trbv3A0A0A6YYE2 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Trbv3A0A0A6YYE2 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Trbv3A0A0A6YYE2 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Trbv3A0A0A6YYE2 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Trbv3A0A0A6YYE2 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trbv3A0A0A6YYE2 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trbv3A0A0A6YYE2 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC13.57□□□□□ -0.24
Trbv3A0A0A6YYE2 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trbv3A0A0A6YYE2 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Trbv3A0A0A6YYE2 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Trbv3A0A0A6YYE2 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Trbv3A0A0A6YYE2 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC13.57□□□□□ -0.24
Trbv3A0A0A6YYE2 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trbv3A0A0A6YYE2 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trbv3A0A0A6YYE2 Gm11841-201ENSMUST00000117060 1963 ntBASIC13.56□□□□□ -0.24
Trbv3A0A0A6YYE2 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trbv3A0A0A6YYE2 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trbv3A0A0A6YYE2 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trbv3A0A0A6YYE2 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trbv3A0A0A6YYE2 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trbv3A0A0A6YYE2 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Trbv3A0A0A6YYE2 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trbv3A0A0A6YYE2 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trbv3A0A0A6YYE2 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trbv3A0A0A6YYE2 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trbv3A0A0A6YYE2 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trbv3A0A0A6YYE2 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trbv3A0A0A6YYE2 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trbv3A0A0A6YYE2 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trbv3A0A0A6YYE2 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trbv3A0A0A6YYE2 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
Trbv3A0A0A6YYE2 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trbv3A0A0A6YYE2 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trbv3A0A0A6YYE2 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trbv3A0A0A6YYE2 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Trbv3A0A0A6YYE2 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trbv3A0A0A6YYE2 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trbv3A0A0A6YYE2 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trbv3A0A0A6YYE2 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trbv3A0A0A6YYE2 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trbv3A0A0A6YYE2 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trbv3A0A0A6YYE2 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC13.55□□□□□ -0.24
Trbv3A0A0A6YYE2 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trbv3A0A0A6YYE2 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trbv3A0A0A6YYE2 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trbv3A0A0A6YYE2 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trbv3A0A0A6YYE2 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trbv3A0A0A6YYE2 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Trbv3A0A0A6YYE2 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trbv3A0A0A6YYE2 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trbv3A0A0A6YYE2 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trbv3A0A0A6YYE2 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Trbv3A0A0A6YYE2 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Trbv3A0A0A6YYE2 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trbv3A0A0A6YYE2 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trbv3A0A0A6YYE2 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC13.55□□□□□ -0.24
Trbv3A0A0A6YYE2 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms